Job Description P00935 Confidence 99.95% Date Wed Jan 25 15:20:10 GMT 2012 Rank 62 Aligned Residues 316 % Identity 12% Template d1w7la_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 2.0

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		43	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.										.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure													.														.	.	.	.	.	.	.	.	.
Query SS confidence													.														.	.	.	.	.	.	.	.	.
Query Sequence		A	H	D	Y	S	R	R	G	N	P	T	.	R	D	V	V	Q	R	A	L	A	E	L	E	G	.	.	.	.	.	.	.	.	.	G	A	G	A	V	L	T	N	T	G	M	S	A	I	H	L	V	T	T	V	F	L	K	P	G	D	L	L	V	A	P	H	D	C	Y	G	G	S	Y	R	L	F	D	S	L	A
Query Conservation													.														.	.	.	.	.	.	.	.	.
Alig confidence													.														.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	F	M	L	N	Q	Y	T	K	T	F	G	Y	P	P	L	T	K	I	L	A	S	F	F	G	E	L	L	G	Q	E	I	D	P	L	R	N	V	L	V	T	V	G	G	Y	G	A	L	F	T	A	F	Q	A	L	V	D	E	G	D	E	V	I	I	I	E	P	F	F	D	C	Y	E	P	M	T	M	M	A	G
Template Known Secondary structure			G	G	G	G	S				T	T																		T													S																T	T								S			T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.											.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.																														.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.																														.	.	.
Query Sequence		K	R	G	C	Y	R	V	L	F	V	D	Q	.	.	.	.	.	.	.	.	.	.	G	D	E	Q	A	L	R	A	A	L	A	E	K	P	K	L	V	L	V	E	S	P	S	N	P	L	L	R	V	.	.	.	V	D	I	A	K	I	C	H	L	A	R	E	V	G	A	V	S	V	V	D	N	T	F	L	S	P
Query Conservation														.	.	.	.	.	.	.	.	.	.																														.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Conservation
Template Sequence		G	R	P	V	F	V	S	L	K	P	G	P	G	E	L	G	S	S	S	N	W	Q	L	D	P	M	E	L	A	G	K	F	T	S	R	T	K	A	L	V	L	N	T	P	N	N	P	L	G	K	V	F	S	R	E	E	L	E	L	V	A	S	L	C	Q	Q	H	D	V	V	C	I	T	D	E	V	Y	Q	W	M
Template Known Secondary structure																S			G	G	G														T	T								S	S		T	T	T																				T								T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		180	.	.	.	.	.									.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure								.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.
Query Sequence		A	L	Q	N	P	L	.	.	.	.	.	.	.	.	A	L	G	A	D	L	V	L	H	S	C	T	K	Y	L	N	G	H	S	D	V	V	A	G	V	V	I	A	K	D	P	D	V	V	T	E	L	A	W	W	A	N	N	I	G	V	T	G	G	A	F	D	S	Y	L	L	L	R	G	L	R	T	L	V	P	R
Query Conservation								.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.																.													.
Template Conservation																															.													.
Template Sequence		V	Y	D	G	H	Q	H	I	S	I	A	S	L	P	G	M	W	E	R	T	L	T	I	G	S	A	G	T	F	.	S	A	T	G	W	K	V	G	W	V	L	G	.	P	D	H	I	M	K	H	L	R	T	V	H	Q	N	S	V	F	H	C	P	T	Q	S	Q	A	A	V	A	E	S	F	E	R	E	Q	L	L
Template Known Secondary structure		B		T	T						G	G	G	S	T	T	T	G	G	G											.	S		G	G	G								.														T	T	T	S																				T
Template Predicted Secondary structure																															.													.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.														.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	E	L	A	Q	R	N	A	Q	A	I	V	K	Y	L	Q	T	Q	P	L	V	K	K	L	Y	H	P	S	L	P	E	N	Q	G	H	E	I	A	A	R	Q	Q	K	G	F	G	A	M	L	S	F	E	L	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	Q	T	L	R	R	F	L	G	G	L
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.
Template Sequence		F	R	Q	P	S	S	Y	F	V	Q	F	P	Q	A	M	Q	R	C	R	D	H	M	I	R	S	L	Q	S	V	G	L	K	P	L	.	.	.	.	.	.	.	I	P	Q	G	S	Y	F	L	I	T	D	I	S	D	F	K	R	K	M	P	D	L	P	G	A	V	D	E	P	Y	D	R	R	F	V	K	W	M	I
Template Known Secondary structure		T	T	S	T	T	S																						T	T	T					.	.	.	.	.	.	.			S	B	S	S																				T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.								.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	F	T	L	A	E	S	L	G	G	V	E	S	L	I	S	H	A	A	T	M	T	H	A	G	M	A	P	E	A	R	A	A	A	G	I	S	E	T	L	L	R	I	S	T	G	I	E	D	G	E	D	L	I	A	D	L	E	N	G	F	R	A	A	N	K
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Sequence		K	N	K	G	L	V	A	I	P	V	S	I	F	Y	S	V	P	H	Q	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	F	D	H	Y	I	R	F	C	F	V	.	.	K	D	E	A	T	L	Q	A	M	D	E	K	L	R	K	W	K	V
Template Known Secondary structure											G	G	G	G	S						T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S		S								.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.																	.	.	.	.	.	.	.	.	400	.	.			.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions