Job Description P00935 Confidence 99.92% Date Wed Jan 25 15:20:10 GMT 2012 Rank 143 Aligned Residues 297 % Identity 16% Template d1v2da_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.90

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		47	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure									.															.	.
Query SS confidence									.															.	.
Query Sequence		S	R	R	G	N	P	T	.	R	D	V	V	Q	R	A	L	A	E	L	E	G	G	.	.	A	G	A	V	L	T	N	T	G	M	S	A	I	H	L	V	T	T	V	F	L	K	P	G	D	L	L	V	A	P	H	D	C	Y	G	G	S	Y	R	L	F	D	S	L	A	K	R	G	C	Y	R	V	L	F	V	D
Query Conservation									.															.	.
Alig confidence									.															.	.
Template Conservation
Template Sequence		D	Q	Y	A	P	P	A	G	L	P	A	L	R	E	A	L	A	E	E	F	A	V	E	P	E	S	V	V	V	T	S	G	A	T	E	A	L	Y	V	L	L	Q	S	L	V	G	P	G	D	E	V	V	V	L	E	P	F	F	D	V	Y	L	P	D	A	F	L	A	G	A	K	A	R	L	V	R	L	D	L	T
Template Known Secondary structure			S				T	T														T	S		G	G	G					S	S															T	T								S			T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		124	.					.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.				.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.							.	.	.	.	190
Predicted Secondary structure				.	.	.	.																														.	.	.																																.	.	.	.	.	.
Query SS confidence				.	.	.	.																														.	.	.																																.	.	.	.	.	.
Query Sequence		Q	G	.	.	.	.	D	E	Q	A	L	R	A	A	L	A	E	K	P	K	L	V	L	V	E	S	P	S	N	P	L	L	R	V	V	.	.	.	D	I	A	K	I	C	H	L	A	R	E	V	G	A	V	S	V	V	D	N	T	F	L	S	P	A	L	Q	N	P	L	.	.	.	.	.	.	A	L	G	A	D
Query Conservation				.	.	.	.																														.	.	.																																.	.	.	.	.	.
Alig confidence				.	.	.	.																														.	.	.																																.	.	.	.	.	.
Template Conservation
Template Sequence		P	E	G	F	R	L	D	L	S	A	L	E	K	A	L	T	P	R	T	R	A	L	L	L	N	T	P	M	N	P	T	G	L	V	F	G	E	R	E	L	E	A	I	A	R	L	A	R	A	H	D	L	F	L	I	S	D	E	V	Y	D	E	L	Y	Y	G	E	R	P	R	R	L	R	E	F	A	P	E	R	T
Template Known Secondary structure		T	T											T	T			T	T								S	S		T	T	T																			T	T								T	T	T	T		B	S	S	S										T	T	T
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	L	H	S	C	T	K	Y	L	N	G	H	S	D	V	V	A	G	V	V	I	A	K	D	P	D	V	V	T	E	L	A	W	W	A	N	N	I	G	V	T	G	G	A	F	D	S	Y	L	L	L	R	G	L	R	T	L	V	P	R	M	E	L	A	Q	R	N	A	Q	A	I	V	K	Y	L	Q	T	Q	P
Query Conservation
Alig confidence																											.	.
Template Conservation																											.	.
Template Sequence		F	T	V	G	S	A	G	K	R	L	E	A	T	G	Y	R	V	G	W	I	V	G	P	K	E	.	.	F	M	P	R	L	A	G	M	R	Q	W	T	S	F	S	A	P	T	P	L	Q	A	G	V	A	E	A	L	K	L	A	R	R	E	G	F	Y	E	A	L	R	E	G	Y	R	R	R	R	D	L	L	A	G
Template Known Secondary structure											T	T		G	G	G									T	T	.	.	T												T	S	S																			T	T
Template Predicted Secondary structure																											.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.			240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	K	K	L	Y	H	P	S	L	P	E	N	Q	G	H	E	I	A	A	R	Q	Q	K	G	F	G	A	M	L	S	F	E	L	D	G	D	E	Q	T	L	R	R	F	L	G	G	L	S	L	F	T	L	A	E	S	L	G	G	V	E	S	L	I	S	H	A	A	T	M	T	H	A	G	M	A	P	E	A	R
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	R	A	M	G	L	R	V	Y	V	P	E	G	T	Y	.	.	.	.	.	.	.	.	.	.	.	.	F	L	M	A	E	L	P	G	W	D	.	.	.	.	.	A	F	R	L	V	E	E	A	R	V	A	L	I	P	A	S	A	F	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T							S	B	S	S	.	.	.	.	.	.	.	.	.	.	.	.							T	T			.	.	.	.	.								T							G	G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.													.	310	.	.	.	.	.	.	.	.						.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	A	G	I	S	E	T	L	L	R	I	S	T	G	I	E	D	G	E	D	L	I	A	D	L	E	N	G	F	R	A	A
Query Conservation
Alig confidence		.															.	.
Template Conservation		.															.	.
Template Sequence		.	L	E	D	P	P	K	D	L	F	R	F	A	F	C	.	.	K	T	E	E	E	L	H	L	A	L	E	R	L	G	R	V
Template Known Secondary structure		.	S	S	S			T	T								.	.	S
Template Predicted Secondary structure		.															.	.
Template SS confidence
			338	.	340	.	.	.	.	.	.	.	.	.	350	.			.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions