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Job DescriptionP00935
Confidence99.86%DateWed Jan 25 15:20:10 GMT 2012
Rank199Aligned Residues300
% Identity16%Templated1sffa_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   46...50.........60...... ...70.........80....... ..90.........100.........110......
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Query Sequence  YSRRGNPTRDVVQRALAELEG. . . GAGAVLTNTGMSAIHLVTTVF. . LKPGDLLVAPHDCYGGSYRLFDSLAKRGC. . . .
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Template Sequence  FQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSA
Template Known Secondary structure  TTTS

SS
SS
SST

TT



SSSS

TTTTT
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   78.80.........90.........100.........110.........120.........130.........140.........150.......
 
   117..120.........130...... ...140.........150..... ....160.........170.
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Query Sequence  . . . . . . . . . . . . . . . . YRVLFVDQGDEQALRAALAE. . . . . KPKLVLVESPSNPLLRVVD. . . . IAKICHLAREVGAVSV
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Template Sequence  GMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLI
Template Known Secondary structure  TS



SS


BGGGTB
T

GGG
SB
TTTTS
B

T
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   158.160.........170.........180.........190.........200.........210.........220.........230.......
 
   172.... ...180.........190.........200.........210.........220.........230.........240.......
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Query Sequence  VDNTF. . . . LSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRT
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Template Sequence  ADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGGFPLAGVTG. . . RAEVMDAVAPGGLGGTYAGNPIACVAALEVLKV
Template Known Secondary structure 
TTTTTTTTSSSSGGGGTTS

S
GGGGTSS

...TTS
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   238.240.........250.........260.........270.........280. ........290.........300.........310....
 
   248.250.........260.........270.........280.........290.........300.... .....310.........320
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Query Sequence  LVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFEL. . . . . . . DGDEQTLRRFLGGLSL
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Template Sequence  F. . EQENLLQKANDLGQKLKDGLLAIAEKHPEIGD. . . . . . . . . . VRGLGAMIAIELFEDGDHNKPDAKLTAEIVARARD
Template Known Secondary structure  ..TTT
TT..........TTBGGG
TTSB
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   315 ....320.........330.........340....... ..350.........360.........370.........380..
 
   321........330.........340.........350.........360...... ...370.........380.....
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Query Sequence  FTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGI. . . . EDGEDLIADLENGFRAANK
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Template Sequence  KGLILLSCGPY. . . . . . . . . . . . . . . . . . . . . . . . . YNVLRILVPLTIEDAQIRQGLEIISQCFDEAKQ
Template Known Secondary structure  TT
STT.........................S



TT



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   383......390... ......400.........410.........420......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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