Job Description P00935 Confidence 99.86% Date Wed Jan 25 15:20:10 GMT 2012 Rank 197 Aligned Residues 297 % Identity 16% Template d1rv3a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.40

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		50	.	.	.	.	.	.	.	.					.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.					.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.											.							.	.	.	.																																											.	.	.	.
Query SS confidence											.	.	.	.											.							.	.	.	.																																											.	.	.	.
Query Sequence		G	N	P	T	R	D	V	V	Q	.	.	.	.	R	A	L	A	E	L	E	G	G	A	.	G	A	V	L	T	N	.	.	.	.	T	G	M	S	A	I	H	L	V	T	T	V	F	L	K	P	G	D	L	L	V	A	P	H	D	C	Y	G	G	S	Y	R	L	F	D	S	L	A	K	R	G	C	.	.	.	.
Query Conservation											.	.	.	.											.							.	.	.	.																																											.	.	.	.
Alig confidence											.	.	.	.											.							.	.	.	.																																											.	.	.	.
Template Conservation
Template Sequence		G	T	E	H	I	D	E	L	E	T	L	C	Q	K	R	A	L	Q	A	Y	G	L	D	P	Q	C	W	G	V	N	V	Q	P	Y	S	G	S	P	A	N	F	A	V	Y	T	A	L	V	E	P	H	G	R	I	M	G	L	D	L	P	D	G	G	H	L	T	H	G	F	M	T	D	K	K	K	I	S	A	T	S
Template Known Secondary structure																					T	T			T	T	T								S	S													T		T	T								G	G	G	T			G	G	G			B		S	S		B		S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
				117	.	.	120	.	.	.	.	.							.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.						.	.	180	.	.	.
Predicted Secondary structure		.	.										.	.	.	.	.	.																																																					.	.	.	.	.
Query SS confidence		.	.										.	.	.	.	.	.																																																					.	.	.	.	.
Query Sequence		.	.	Y	R	V	L	F	V	D	Q	G	.	.	.	.	.	.	D	E	Q	A	L	R	A	A	L	A	E	K	P	K	L	V	L	V	E	S	P	S	N	P	L	L	R	V	V	D	I	A	K	I	C	H	L	A	R	E	V	G	A	V	S	V	V	D	N	T	F	L	.	.	.	.	.	S	P	A	L	Q	N
Query Conservation		.	.										.	.	.	.	.	.																																																					.	.	.	.	.
Alig confidence		.	.										.	.	.	.	.	.																								.																													.	.	.	.	.
Template Conservation																																										.
Template Sequence		I	F	F	E	S	M	A	Y	K	V	N	P	D	T	G	Y	I	D	Y	D	R	L	E	E	N	A	R	L	F	H	P	K	L	I	I	A	G	T	S	C	.	Y	S	R	N	L	D	Y	G	R	L	R	K	I	A	D	E	N	G	A	Y	L	M	A	D	M	A	H	I	S	G	L	V	V	A	G	V	V	P	S
Template Known Secondary structure				S							B		T	T	T		S	B															S							S	S	.			S														T	T								T	T	T							T	S	S
Template Predicted Secondary structure																																										.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.					.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.							.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																																				.	.	.	.																						.	.	.	.	.	.
Query SS confidence																																				.	.	.	.																						.	.	.	.	.	.
Query Sequence		P	L	A	L	G	A	D	L	V	L	H	S	C	T	K	Y	L	N	G	H	S	D	V	V	A	G	V	V	I	A	K	D	P	D	.	.	.	.	V	V	T	E	L	A	W	W	A	N	N	I	G	V	T	G	G	A	F	D	S	.	.	.	.	.	.	Y	L	L	L	R	G	L	R	T	L	V	P	R	M	E
Query Conservation																																				.	.	.	.																						.	.	.	.	.	.
Alig confidence					.																															.	.	.	.																						.	.	.	.	.	.
Template Conservation					.
Template Sequence		P	F	E	.	H	C	H	V	V	T	T	T	T	H	K	T	L	R	G	C	R	A	G	M	I	F	Y	R	R	G	V	R	S	E	I	L	Y	N	L	E	S	L	I	N	S	A	V	F	P	G	L	Q	G	G	P	H	N	H	A	I	A	G	V	A	V	A	L	K	Q	A	M	T	P	E	F	K	E	Y	Q	R
Template Known Secondary structure		G	G	G	.	T		S						S	S	G	G	G				S									S	B					B												T	T	T	T			S																	T	S
Template Predicted Secondary structure					.
Template SS confidence
		244	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	Q	R	N	A	Q	A	I	V	K	Y	L	Q	T	Q	P	L	V	K	K	L	Y	H	P	S	L	P	E	N	Q	G	H	E	I	A	A	R	Q	Q	K	G	F	G	A	M	L	S	F	E	L	D	G	D	E	Q	T	L	R	R	F	L	G	G	L	S	L	F	T	L	A	E	S	L	G	G	V	E	S	L
Query Conservation
Alig confidence																			.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	V	V	A	N	C	R	A	L	S	A	A	L	V	E	L	G	.	.	Y	K	I	V	T	G	G	S	D	N	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	L	V	D	L	R	S	K	G	T	D	G	G	R	A	E	K	V	L	E	A	C	S	I	A	C	N	K	N	T	C	P	G	D
Template Known Secondary structure																	T	T	.	.				G	G	G	S		S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						G	G	G	G	T													T	T									S	S
Template Predicted Secondary structure																			.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.			.	.	.	350	.	.	.	.	.	.	.																.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.					.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																																		.	.	.	.
Query SS confidence																																		.	.	.	.
Query Sequence		I	S	H	A	A	T	M	T	H	A	G	M	A	P	E	A	R	A	A	A	G	I	S	E	T	L	L	R	I	S	T	G	.	.	.	.	I	E	D	G	E	D	L	I	A	D	L	E	N	G	F	R	A	A
Query Conservation																																		.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	S	A	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	G	L	R	L	G	T	P	A	L	T	S	R	G	L	L	E	K	D	F	Q	K	V	A	H	F	I	H	R	G
Template Known Secondary structure		S		T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		393	.	.	.	.																			.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions