Job Description P00935 Confidence 99.85% Date Wed Jan 25 15:20:10 GMT 2012 Rank 201 Aligned Residues 315 % Identity 13% Template d1pmma_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Pyridoxal-dependent decarboxylase Resolution 2.00

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60					.	.	.	.	.	.	.	.	.								70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.													.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																	.	.	.	.										.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.										.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	S	R	R	G	N	P	T	R	D	V	V	Q	R	A	.	.	.	.	L	A	E	L	E	G	G	A	G	.	.	.	.	.	.	.	A	V	L	T	N	T	G	M	S	A	I	H	L	V	T	T	V	F	.	.	.	.	.	.	.	.	.	.	.	.	L	K	P	G	D	L	L	V	A	P	H	D	C	Y	G
Query Conservation																	.	.	.	.										.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.										.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I
Template Known Secondary structure		T		T	T	T	S																		T	T					T	T	S			S					S	S																								T				S							S	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.							.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.							.	.	170
Predicted Secondary structure																									.	.	.	.	.	.																																											.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.																																											.	.	.	.	.	.
Query Sequence		G	S	Y	R	L	F	D	S	L	A	K	R	G	C	Y	R	V	L	F	V	D	Q	G	.	.	.	.	.	.	D	E	Q	A	L	R	A	A	L	A	E	K	P	K	L	V	L	V	E	S	P	S	N	P	L	L	R	V	V	D	I	A	K	I	C	H	L	A	R	E	V	G	.	.	.	.	.	.	A	V	S
Query Conservation																									.	.	.	.	.	.																																											.	.	.	.	.	.
Alig confidence					.	.	.	.																	.	.	.	.	.	.																																											.	.	.	.	.	.
Template Conservation					.	.	.	.
Template Sequence		C	W	H	.	.	.	.	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	N	T	I	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M
Template Known Secondary structure					.	.	.	.						T	T									B	T	T	B		S												T	T							B	B	S		T	T	T		B	B
Template Predicted Secondary structure					.	.	.	.
Template SS confidence
		165	.	.					.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		171	.	.	.	.	.	.	.	.	180	.									.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.
Query Sequence		V	V	D	N	T	F	L	S	P	A	L	.	.	.	.	.	.	.	.	Q	N	P	L	A	L	G	A	D	L	V	L	H	S	C	T	K	Y	L	N	G	H	S	D	V	V	A	G	V	V	I	A	K	D	P	D	V	V	T	E	L	A	W	W	A	N	N	I	G	V	T	G	G	A	F	D	S	Y	L	L	L
Query Conservation													.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.																										.
Template Conservation																																														.
Template Sequence		H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	.	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R
Template Known Secondary structure						T	T	G	G	G	T						T	T				S	T	T	S	T	T								T	T	T	T	T				S	S		.						S	S	G	G	G	S		G	G	G							T	T								S			S
Template Predicted Secondary structure																																														.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.				.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.									.	.	.
Query SS confidence																																																									.									.	.	.
Query Sequence		R	G	L	R	T	L	V	P	R	M	E	L	A	Q	R	N	A	Q	A	I	V	K	Y	L	Q	T	Q	P	L	V	K	K	L	Y	H	P	S	L	P	E	N	Q	G	H	E	I	A	A	R	Q	Q	K	G	F	G	.	A	M	L	S	F	E	L	D	.	.	.	G	D	E	Q	T	L	R	R	F	L	G	G	L
Query Conservation																																																									.									.	.	.
Alig confidence																																																									.									.	.	.
Template Conservation
Template Sequence		P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L
Template Known Secondary structure		B	S																																						T	T	S										T	T	T	B	S	S								T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.					.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.
Query SS confidence																																																		.	.	.	.
Query Sequence		S	L	F	T	L	A	E	S	L	G	G	V	E	S	L	I	S	H	A	A	T	M	T	H	A	G	M	A	P	E	A	R	A	A	A	G	I	S	E	T	L	L	R	I	S	T	G	I	.	.	.	.	E	D	G	E	D	L	I	A	D	L	E	N	G	F	R	A	A	N	K
Query Conservation																																																		.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S	L	K	Y	L	S	D
Template Known Secondary structure			T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B								T	T		T	T										T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		400	.	.	.																					.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions