Job Description P00935 Confidence 99.64% Date Wed Jan 25 15:20:10 GMT 2012 Rank 235 Aligned Residues 286 % Identity 15% Template d1ohwa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.30

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.																													.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	P	T	R	D	V	V	Q	R	A	L	A	E	L	E	.	.	G	G	A	G	A	V	L	T	N	T	G	M	S	A	I	H	L	V	T	T	V	F	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	G	D	L	L	V	A	P	H	D	C
Query Conservation																	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	N	F	V	E	K	L	R	E	S	L	L	S	V	A	P	K	G	M	S	Q	L	I	T	M	A	C	G	S	C	S	N	E	N	A	F	K	T	I	F	M	W	Y	R	S	K	E	R	G	Q	S	A	F	S	K	E	E	L	E	T	C	M	I	N	Q	A	P	G	C	P	D	Y	S	I	L	S	F	M	G	A
Template Known Secondary structure		T	T								T	G	G	G	G			T	T								S	S																						T	T													T	T		T	T	T	S									T	T
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.																												.	.	.	130	.	.	.	.	.							.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.
Query Sequence		Y	G	G	S	Y	R	L	F	D	S	L	A	K	R	G	C	Y	R	V	L	F	V	D	Q	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	A	L	R	A	A	L	A	.	.	.	.	.	.	E	K	P	K	L	V	L	V	E	S	P	S
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.
Template Conservation
Template Sequence		F	H	G	R	T	M	G	C	L	A	T	T	H	S	K	A	I	H	K	I	D	I	P	S	F	D	W	P	I	A	P	F	P	R	L	K	Y	P	L	E	E	F	V	K	E	N	Q	Q	E	E	A	R	C	L	E	E	V	E	D	L	I	V	K	Y	R	K	K	K	K	T	V	A	G	I	I	V	E	P	I	Q
Template Known Secondary structure					S	S						T			S						T	T																S	S	G	G	G																										T	T										S	S	B
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		148	.	150	.	.	.	.	.					.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.																							.	.	.	.													.	.
Query SS confidence										.	.	.	.																							.	.	.	.													.	.
Query Sequence		N	P	L	L	R	V	V	D	.	.	.	.	I	A	K	I	C	H	L	A	R	E	V	G	A	V	S	V	V	D	N	T	F	L	.	.	.	.	S	P	A	L	Q	N	P	L	A	L	G	A	.	.	D	L	V	L	H	S	C	T	K	Y	L	N	G	H	S	D	V	V	A	G	V	V	I	A	K	D	P	D
Query Conservation										.	.	.	.																							.	.	.	.													.	.
Alig confidence										.	.	.	.																							.	.	.	.													.	.																												.
Template Conservation																																																																																	.
Template Sequence		S	E	G	G	D	N	H	A	S	D	D	F	F	R	K	L	R	D	I	S	R	K	H	G	C	A	F	L	V	D	E	V	Q	T	G	G	G	S	T	G	K	F	W	A	H	E	H	W	G	L	D	D	P	A	D	V	M	T	F	S	K	K	M	M	T	G	G	F	F	H	K	E	E	F	R	P	N	A	P	.
Template Known Secondary structure			T	T	T		B																	T	T								T	T	T		S	S	T	T	S	S	S	S	G	G	G	G	G			S	S			S						G	G	G	S	S							G	G	G	S		S	S	T	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	T	E	L	A	W	W	A	N	N	I	G	V	T	G	G	A	F	D	S	Y	L	L	L	R	G	L	R	T	L	V	P	R	M	E	L	A	Q	R	N	A	Q	A	I	V	K	Y	L	Q	T	Q	P	L	V	K	K	L	Y	H	P	S	L	P	E	N	Q	G	H	E	I	A	A	R	Q	Q	K	G	F	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.																									.	.																																		.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																									.	.																																		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	Y	R	I	F	N	T	W	L	G	D	P	S	K	N	L	L	L	A	E	V	I	N	I	I	.	.	K	R	E	D	L	L	S	N	A	A	H	A	G	K	V	L	L	T	G	L	L	D	L	Q	A	R	Y	P	Q	F	I	S	R	.	.	.	.	.	.	.	.	.	V	R	G	R	G
Template Known Secondary structure		.	.	.	.	.	.	.	T	S	S			S		S	S																.	.			T	T																								T	T	T				.	.	.	.	.	.	.	.	.					T
Template Predicted Secondary structure		.	.	.	.	.	.	.																									.	.																																		.	.	.	.	.	.	.	.	.
Template SS confidence
									348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.			.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.										.	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	L	S	F	E	L	D	G	D	E	Q	T	L	R	R	F	L	G	G	L	S	L	F	T	L	A	E	S	L	G	G	V	E	S	L	I	S	H	A	A	T	M	T	H	A	G	M	A	P	E	A	R	A	A	A	G	I	S	E	T	L	L	R	I	S	T	G	I	E	D	G	E	D	L	I	A	D	L	E
Query Conservation
Alig confidence										.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	F	C	S	F	D	T	P	.	D	E	S	I	R	N	K	L	I	S	I	A	R	N	K	G	V	M	L	G	G	C	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	S	I	R	F	R	P	T	L	V	F	R	D	H	H	A	H	L	F	L
Template Known Secondary structure		T							S	.	S														T	T							T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T								T	T
Template Predicted Secondary structure										.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		410	.	.	.	.	.	.	.		.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440																												.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
		378	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	F	R	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	F	S	D	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		462	.	.	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions