Job Description P00935 Confidence 100.00% Date Wed Jan 25 15:20:10 GMT 2012 Rank 29 Aligned Residues 329 % Identity 12% Template d1o69a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.84

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		Y	S	R	R	G	N	P	T	R	D	V	V	Q	R	A	L	A	E	L	E	G	G	A	G	A	V	L	T	N	T	G	M	S	A	I	H	L	V	T	T	V	F	.	L	K	P	G	D	L	L	V	A	P	H	D	C	Y	G	G	S	Y	R	L	F	D	S	L	A	K	R	G	C	Y	R	V	L	F	V	D	Q
Query Conservation																																												.
Alig confidence							.																																					.																									.	.	.	.
Template Conservation							.																																																														.	.	.	.
Template Sequence		I	A	P	L	G	.	E	F	V	N	R	F	E	Q	S	V	K	D	Y	S	K	S	E	N	A	L	A	L	N	S	A	T	A	A	L	H	L	A	L	R	V	A	G	V	K	Q	D	D	I	V	L	A	S	S	F	T	F	I	A	S	V	A	P	I	C	Y	L	.	.	.	.	K	A	K	P	V	F	I	D	C
Template Known Secondary structure		T	S		T	T	.																	S						S													T	T			T	T							S	S	S		G	G	G	T						T	.	.	.	.	T								B
Template Predicted Secondary structure							.																																																														.	.	.	.
Template SS confidence
		27	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.					.	.	.	.	.	.	.	100	.
		125						.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.																																																							.	.																	.	.
Query SS confidence			.	.	.	.	.																																																							.	.																	.	.
Query Sequence		G	.	.	.	.	.	D	E	Q	A	L	R	A	A	L	A	E	K	P	K	L	V	L	V	E	S	P	S	N	P	L	L	R	V	V	D	I	A	K	I	C	H	L	A	R	E	V	G	A	V	S	V	V	D	N	T	F	L	S	P	.	.	A	L	Q	N	P	L	A	L	G	A	D	L	V	L	H	S	.	.
Query Conservation			.	.	.	.	.																																																							.	.																	.	.
Alig confidence			.	.	.	.	.																																																							.	.																	.	.
Template Conservation
Template Sequence		D	E	T	Y	N	I	D	V	D	L	L	K	L	A	I	K	E	C	E	K	K	P	K	A	L	I	L	T	H	L	Y	G	N	A	A	K	M	D	E	I	V	E	I	C	K	E	N	D	I	V	L	I	E	D	A	A	E	A	L	G	S	F	Y	K	N	K	A	L	G	T	F	G	E	F	G	V	Y	S	Y	N
Template Known Secondary structure			T	T	S	S	B													S	S										G	G	G															T	T								T	T		T	T				T	T			T	T	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.															.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	T	K	Y	L	N	G	H	S	D	V	V	A	G	V	V	I	A	K	D	P	D	V	V	T	E	L	A	W	W	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	G	V	T	G	G	A	F	D	S	Y	L	L	L	R	G	L	R	T	L	V	P	R	M	E	L	A	Q	R	N	A	Q	A
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.
Template Sequence		G	N	K	I	I	T	T	S	G	.	.	.	G	G	M	L	I	G	K	N	K	E	K	I	E	K	A	R	F	Y	S	T	Q	A	R	E	N	C	L	H	Y	E	H	L	D	Y	G	Y	N	Y	R	L	S	N	V	L	G	A	I	G	V	A	Q	M	E	V	L	E	Q	R	V	L	K	K	R	E	I	Y	E	W
Template Known Secondary structure		T	T	S	S	S			S	S	.	.	.							S												T	B	T				S	S	S	S				S	S				B		B														T	T
Template Predicted Secondary structure											.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190				.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.							.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.
Query Sequence		I	V	K	Y	L	Q	T	Q	P	L	V	K	K	L	Y	H	P	S	L	P	E	N	Q	G	H	E	I	A	A	R	Q	Q	.	.	.	.	.	.	K	G	F	G	A	M	L	S	F	E	L	D	G	D	E	Q	T	L	R	R	F	L	G	G	L	S	L	F	T	L	A	E	S	L	G	G	V	E	S	L	I	S
Query Conservation																																		.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.
Template Conservation
Template Sequence		Y	K	E	F	L	G	E	Y	F	S	F	L	D	E	L	E	N	S	R	S	N	R	W	L	S	T	A	L	I	N	F	D	K	N	E	L	N	A	C	Q	K	D	I	N	I	S	Q	K	N	I	T	L	H	P	K	I	S	K	L	I	E	D	L	K	N	K	Q	I	E	T	R	P	L	W	K	A	M	H	T	Q
Template Known Secondary structure							T	T	T								T	T						S	S						S			G	G	G	S																														T	T				B						G	G	G
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	A	T	M	T	H	A	G	M	A	P	E	A	R	A	A	A	G	I	S	E	T	L	L	R	I	S	T	G	I	E	D	G	E	D	L	I	A	D	L	E	N	G	F	R	A	A	N	K
Query Conservation
Alig confidence																		.	.	.
Template Conservation																		.	.	.
Template Sequence		E	V	F	K	G	A	K	A	Y	L	N	G	N	S	E	L	.	.	.	F	F	Q	K	G	I	C	L	P	S	G	T	A	M	S	K	D	D	V	Y	E	I	S	K	L	I	L	K	S	I	K
Template Known Secondary structure		G	G	G	T	T							S					.	.	.												T	T
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.				.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions