Job Description P00935 Confidence 99.96% Date Wed Jan 25 15:20:10 GMT 2012 Rank 53 Aligned Residues 296 % Identity 19% Template d1kl1a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.93

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		50	.	.	.	.	.	.					.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure									.	.	.	.															.
Query SS confidence									.	.	.	.															.
Query Sequence		G	N	P	T	R	D	V	.	.	.	.	V	Q	R	A	L	A	E	L	E	G	G	A	G	A	.	V	L	T	N	T	G	M	S	A	I	H	L	V	T	T	V	F	L	K	P	G	D	L	L	V	A	P	H	D	C	Y	G	G	S	Y	R	L	F	D	S	L	A	K	R	G	C	Y	R	V	L	F	V	D	Q
Query Conservation									.	.	.	.															.
Alig confidence									.	.	.	.															.																																							.
Template Conservation																																																																		.
Template Sequence		G	C	E	Y	V	D	I	V	E	E	L	A	R	E	R	A	K	Q	L	F	G	A	E	H	A	N	V	Q	P	H	S	G	A	Q	A	N	M	A	V	Y	F	T	V	L	E	H	G	D	T	V	L	G	M	N	L	S	H	G	G	H	L	T	H	G	.	S	P	V	N	F	S	G	V	Q	Y	N	F	V	A	Y
Template Known Secondary structure																								S							S	S															T	T								G	G	G	T			G	G	G	T	.		T	T	S						S
Template Predicted Secondary structure																																																																		.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		125									.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.					.	190	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.																																																																.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.																																																																.	.	.	.
Query Sequence		G	.	.	.	.	.	.	.	.	D	E	Q	A	L	R	A	A	L	A	E	K	P	K	L	V	L	V	E	S	P	S	N	P	L	L	R	V	V	D	I	A	K	I	C	H	L	A	R	E	V	G	A	V	S	V	V	D	N	T	F	L	S	P	A	L	Q	N	P	L	A	L	G	.	.	.	.	A	D	L	V
Query Conservation			.	.	.	.	.	.	.	.																																																																.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.																	.																																															.	.	.	.
Template Conservation																											.
Template Sequence		G	V	D	P	E	T	H	V	I	D	Y	D	D	V	R	E	K	A	R	L	H	R	P	K	L	.	I	V	A	A	A	S	A	Y	P	R	I	I	D	F	A	K	F	R	E	I	A	D	E	V	G	A	Y	L	M	V	D	M	A	H	I	A	G	L	V	A	A	G	L	H	P	N	P	V	P	Y	A	H	F	V
Template Known Secondary structure			B		T	T	T		S	B															S		.						S	S			S															T								T	T	T						T	T	S	S			S	T	T	T		S
Template Predicted Secondary structure																											.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.						.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.
Query SS confidence																																														.	.	.	.	.
Query Sequence		L	H	S	C	T	K	Y	L	N	G	H	S	D	V	V	A	G	V	V	I	A	K	D	P	D	V	V	T	E	L	A	W	W	A	N	N	I	G	V	T	G	G	A	F	.	.	.	.	.	D	S	Y	L	L	L	R	G	L	R	T	L	V	P	R	M	E	L	A	Q	R	N	A	Q	A	I	V	K	Y	L	Q
Query Conservation																																														.	.	.	.	.
Alig confidence															.	.	.																													.	.	.	.	.
Template Conservation															.	.	.
Template Sequence		T	T	T	T	H	K	T	L	R	G	P	R	G	.	.	.	G	M	I	L	C	Q	E	Q	F	A	K	Q	I	D	K	A	I	F	P	G	I	Q	G	G	P	L	M	H	V	I	A	A	K	A	V	A	F	G	E	A	L	Q	D	D	F	K	A	Y	A	K	R	V	V	D	N	A	K	R	L	A	S	A	L	Q
Template Known Secondary structure					S	S	S	T	T				S		.	.	.																		T	T	T	T		S	S																		S
Template Predicted Secondary structure															.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.				.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	P	L	V	K	K	L	Y	H	P	S	L	P	E	N	Q	G	H	E	I	A	A	R	Q	Q	K	G	F	G	A	M	L	S	F	E	L	D	G	D	E	Q	T	L	R	R	F	L	G	G	L	S	L	F	T	L	A	E	S	L	G	G	V	E	S	L	I	S	H	A	A	T	M	T	H	A	G	M	A	P
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		N	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	T	L	V	S	G	G	T	D	N	H	L	L	L	V	D	L	R	P	Q	Q	L	T	G	K	T	A	E	K	V	L	D	E	V	G	I	T	V	N	K	N	T	I	P	Y	D	P	E	S	P	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T				G	G	G	S		S	S	S							G	G	G	T														T									T	T		S	S		T	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		298	.																		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.									.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.
Query Sequence		E	A	R	A	A	A	G	I	S	E	T	L	L	R	I	S	T	G	I	.	.	.	.	.	.	.	.	E	D	G	E	D	L	I	A	D	L	E	N	G	F	R	A	A	N
Query Conservation																					.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.													.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	F	V	T	S	G	I	R	I	G	T	A	A	V	T	T	R	G	F	G	L	E	E	M	D	E	I	A	A	I	I	G	L	V	L	K	N	V	G
Template Known Secondary structure		.	.	.	.	.	.	.	T	T		S												T	T																		T		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions