Job Description P00935 Confidence 99.84% Date Wed Jan 25 15:20:10 GMT 2012 Rank 208 Aligned Residues 316 % Identity 19% Template d1bj4a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.65

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.					.	60	.	.	.	.	.	.	.	.					.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.											.	.	.	.			.
Query SS confidence																																	.	.	.	.											.	.	.	.			.
Query Sequence		H	L	S	S	T	Y	N	F	T	G	F	N	E	P	R	A	H	D	Y	S	R	R	G	N	P	T	R	D	V	V	Q	.	.	.	.	R	A	L	A	E	L	E	G	G	A	.	.	.	.	G	A	.	V	L	T	N	T	G	M	S	A	I	H	L	V	T	T	V	F	L	K	P	G	D	L	L	V	A	P	H
Query Conservation																																	.	.	.	.											.	.	.	.			.
Alig confidence																					.												.	.	.	.											.	.	.	.			.
Template Conservation																					.
Template Sequence		A	L	G	S	C	L	N	N	K	Y	S	E	G	Y	P	G	Q	R	Y	.	Y	G	G	T	E	F	I	D	E	L	E	T	L	C	Q	K	R	A	L	Q	A	Y	K	L	D	P	Q	C	W	G	V	N	V	Q	P	Y	S	G	S	P	A	N	F	A	V	Y	T	A	L	V	E	P	H	G	R	I	M	G	L	D
Template Known Secondary structure				T	S	G	G	G	T							T	T			S	.	S	S																				T	T			T	T	T								S	S													T		T	T
Template Predicted Secondary structure																					.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		99	100	.	.	.	.	.	.	.	.							.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.							.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.																		.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.																		.	.	.	.	.	.
Query Sequence		D	C	Y	G	G	S	Y	R	L	F	.	.	.	.	.	.	D	S	L	A	K	R	G	C	Y	R	V	L	F	V	D	Q	G	.	.	.	.	.	.	D	E	Q	A	L	R	A	A	L	A	E	K	P	K	L	V	L	V	E	S	P	S	N	P	L	L	R	V	V	D	I	A	K	I	C	H	L	A	R	E	V
Query Conservation												.	.	.	.	.	.																		.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.																		.	.	.	.	.	.																													.
Template Conservation																																																																					.
Template Sequence		L	P	D	G	G	H	L	T	H	G	F	M	T	D	K	K	K	I	S	A	T	S	I	F	F	E	S	M	P	Y	K	V	N	P	D	T	G	Y	I	N	Y	D	Q	L	E	E	N	A	R	L	F	H	P	K	L	I	I	A	G	T	S	C	Y	S	R	N	L	.	E	Y	A	R	L	R	K	I	A	D	E	N
Template Known Secondary structure		G	G	G	T			G	G	G			B		S	S		B		S						S							B		T	T	T		S	B															S							S	S			S			.												T
Template Predicted Secondary structure																																																																					.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.
		167	.	.	170	.	.	.	.	.	.	.						.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.															.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	V	S	V	V	D	N	T	F	L	.	.	.	.	.	S	P	A	L	Q	N	P	L	A	L	G	A	D	L	V	L	H	S	C	T	K	Y	L	N	G	H	S	D	V	V	A	G	V	V	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	P	D	V	V	T	E	L	A	W	W	A	N
Query Conservation													.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.										.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.
Template Sequence		G	A	Y	L	M	A	D	M	A	H	I	S	G	L	V	A	A	G	V	V	P	S	P	F	E	.	H	C	H	V	V	T	T	T	T	H	K	T	L	R	G	C	R	A	G	M	I	F	Y	R	K	G	V	K	S	V	D	P	A	T	G	K	E	I	L	Y	N	L	E	S	L	I	N	S	A	V	F	P	G	L
Template Known Secondary structure		T								G	G	G						T	T	S	S			G	G	G	.	T		S						S	S	G	G	G				S									S						T	T	T																	T	T	T	T
Template Predicted Secondary structure																											.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.				.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		N	I	G	V	T	G	G	A	F	D	S	Y	L	L	L	R	G	L	.	.	.	R	T	L	V	P	R	M	E	L	A	Q	R	N	A	Q	A	I	V	K	Y	L	Q	T	Q	P	L	V	K	K	L	Y	H	P	S	L	P	E	N	Q	G	H	E	I	A	A	R	Q	Q	K	G	F	G	A	M	L	S	F	E	L
Query Conservation																				.	.	.
Alig confidence																				.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	G	G	P	H	N	H	A	I	A	G	V	A	V	A	L	K	Q	A	M	T	L	E	F	K	V	Y	Q	H	Q	V	V	A	N	C	R	A	L	S	E	A	L	T	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	K	I	V	T	G	G	S	D	N	H	L	I	L	V	D	L
Template Known Secondary structure				S																T	T	S																								T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T				T	T	S	S		S	S	S						G
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.																		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.					.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.					370	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.																																												.	.	.	.
Query SS confidence																								.	.	.	.																																												.	.	.	.
Query Sequence		D	G	D	E	Q	T	L	R	R	F	L	G	G	L	S	L	F	T	L	A	E	S	.	.	.	.	L	G	G	V	E	S	L	I	S	H	A	A	T	M	T	H	A	G	M	A	P	E	A	R	A	A	A	G	I	S	E	T	L	L	R	I	S	T	G	I	E	D	G	.	.	.	.	E	D	L	I	A	D	L
Query Conservation																								.	.	.	.																																												.	.	.	.
Alig confidence																								.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	S	K	G	T	D	G	G	R	A	E	K	V	L	E	A	C	S	I	A	C	N	K	N	T	C	P	G	D	R	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	P	S	G	L	R	L	G	T	P	A	L	T	S	R	G	L	L	E	K	D	F	Q	K	V
Template Known Secondary structure		G	G	G	T													T	T									T	T		S		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S														T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.																							.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
		377	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	G	F	R	A	A	N	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	H	F	I	H	R	G	I	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		422	.	.	.	.	.	.	.	430

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions