Job Description P00935 Confidence 99.84% Date Wed Jan 25 15:20:10 GMT 2012 Rank 205 Aligned Residues 335 % Identity 13% Template d1ax4a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 2.10

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	N	D	D	E	Q	Y	G	C	V	V	P	P	I	H	L	S	S	T	Y	N	F	T	G	F	N	E	P	R	A	H	D	Y	S	R	R	G	N	P	T	R	D	V	V	Q	R	A	L	A	E	L	E	G	G	A	G	A	V	L	T	N	T	G	M	S	A	I	H	L	V	T	T	V	F	L	K	P	G	D
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.								.	.
Template Conservation																						.	.	.	.	.	.	.	.								.	.
Template Sequence		D	L	L	T	D	S	G	T	N	A	M	S	D	H	Q	W	A	A	M	I	.	.	.	.	.	.	.	.	T	G	D	E	A	Y	A	.	.	G	S	R	N	Y	Y	D	L	K	D	K	A	K	E	L	F	N	Y	D	Y	I	I	P	A	H	Q	G	R	G	A	E	N	I	L	F	P	V	L	L	K	Y	K	Q
Template Known Secondary structure				S		S	S	S														.	.	.	.	.	.	.	.	T					S	S	.	.	S																								S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.								.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.									.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		93	.							.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.																.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Query SS confidence				.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Query Sequence		L	L	.	.	.	.	.	.	V	A	P	H	D	C	Y	G	G	S	Y	R	L	F	D	S	L	A	K	R	G	C	Y	R	V	L	F	V	D	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	Q	A	L	R	A	A	L	A	E	.	.	.	.	K	P	K	L	V	L	V	E	S	P	S
Query Conservation				.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Alig confidence				.	.	.	.	.	.													.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template Conservation																						.	.	.
Template Sequence		K	E	G	K	A	K	N	P	V	F	I	S	N	F	H	F	D	T	T	A	.	.	.	A	H	V	E	L	N	G	C	K	A	I	N	I	V	T	E	K	A	F	D	S	E	T	Y	D	D	W	K	G	D	F	D	I	K	K	L	K	E	N	I	A	Q	H	G	A	D	N	I	V	A	I	V	S	T	V	T	C
Template Known Secondary structure			T	T			S	S						S	S							.	.	.						T	T							B		G	G	G	G		T	T	S			T	T	T	T		B														G	G	G								S	S	B
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		148	.	150	.					.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.																		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure						.	.	.	.																													.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.																													.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	P	L	L	.	.	.	.	R	V	V	D	I	A	K	I	C	H	L	A	R	E	V	G	A	V	S	V	V	D	N	T	F	L	S	P	.	A	L	Q	N	P	L	A	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	L	V	L	H	S	C	T	K	Y	L	N	G	H	S	D
Query Conservation						.	.	.	.																													.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.																													.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation																																																																									.
Template Sequence		N	S	A	G	G	Q	P	V	S	M	S	N	L	K	E	V	Y	E	I	A	K	Q	H	G	I	F	V	V	M	D	S	A	R	F	C	E	N	A	Y	F	I	K	A	R	D	P	K	Y	K	N	A	T	I	K	E	V	I	F	D	M	Y	K	Y	A	D	A	L	T	M	S	A	.	K	D	P	L	L	N	I	G
Template Known Secondary structure		T	T	T	T	S	B																		T								T	T													G	G	G	T	T											G	G	G		S							.						S	S
Template Predicted Secondary structure																																																																									.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		V	V	A	G	V	V	I	A	K	D	P	D	V	V	T	E	L	A	W	W	A	N	N	I	G	V	T	G	G	A	F	D	S	Y	L	L	L	R	G	L	R	T	L	V	P	R	M	.	E	L	A	Q	R	N	A	Q	A	I	V	K	Y	L	Q	T	Q	P	L	V	K	K	L	Y	H	P	S	L	P	E	N	Q
Query Conservation																																																	.
Alig confidence																																																	.																	.	.
Template Conservation																																																																		.	.
Template Sequence		G	L	V	A	I	R	D	N	E	E	I	F	T	L	A	R	Q	R	C	V	P	M	E	G	F	V	T	Y	G	G	L	A	G	R	D	M	A	A	M	V	Q	G	L	E	E	G	T	E	E	E	Y	L	H	Y	R	I	G	Q	V	K	Y	L	G	D	.	.	R	L	R	E	A	G	I	P	I	Q	Y	P	T	G
Template Known Secondary structure							S	S																T		S	T	T	T	T	T																T	T																		.	.					T	T			B		S	S
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.			.	.	340	.	.	.	.	.	.	.	.	.	350	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.									.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.
Query Sequence		G	H	E	I	A	A	R	Q	Q	K	G	F	G	A	M	L	S	F	E	L	D	G	.	.	.	.	.	.	.	.	D	E	Q	T	L	R	R	F	L	G	G	L	S	L	F	T	L	A	E	S	L	G	G	V	E	S	L	I	S	H	A	A	T	M	T	H	A	G	M	A	P	E	A	R	A	A	A	G	I	S
Query Conservation																								.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.																																																									.	.	.	.	.	.	.	.	.	.
Template Sequence		G	H	.	.	.	.	.	.	.	.	.	.	.	.	A	V	F	V	D	C	K	K	L	V	P	Q	I	P	G	D	Q	F	P	A	Q	A	V	I	N	A	L	Y	L	E	S	G	V	R	A	V	E	I	G	S	F	L	L	G	R	D	P	A	T	G	E	Q	K	H	A	D	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S	.	.	.	.	.	.	.	.	.	.	.	.						S	T	T	T		T	T	S		G	G	G																						S						B		T	T	T		S	B				S	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.																																																									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		352	.													.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
		357	.	.	360	.	.	.	.	.	.	.	.		.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		E	T	L	L	R	I	S	T	G	I	E	D	.	G	E	D	L	I	A	D	L	E	N	G	F	R	A	A	N	K
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		M	E	F	M	R	L	T	I	A	R	R	V	Y	T	N	D	H	M	D	Y	I	A	D	A	L	I	G	L	K	E
Template Known Secondary structure											T	T	S	S														T	T
Template Predicted Secondary structure
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions