Job Description P00935 Confidence 99.90% Date Wed Jan 25 15:20:10 GMT 2012 Rank 160 Aligned Residues 327 % Identity 14% Template d1ajsa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.60

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.											.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	D	D	E	Q	Y	G	C	V	V	P	P	I	H	L	S	S	T	Y	N	F	T	G	F	N	E	P	R	A	H	D	Y	S	R	R	G	N	P	T	R	D	V	V	Q	R	A	L	A	E	L	.	.	.	.	.	.	.	.	.	.	E	G	G	A	G	A	V	L	T	N	T	G	M	S	A	I	H	L	V
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.
Template Sequence		Y	R	T	D	D	C	Q	P	W	V	L	P	V	V	R	K	V	E	Q	R	I	A	N	N	S	S	L	N	H	E	Y	L	.	.	.	.	P	I	L	G	L	A	E	F	R	T	C	A	S	R	L	A	L	G	D	D	S	P	A	L	Q	E	K	R	V	G	G	V	Q	S	L	G	G	T	G	A	L	R	I	G
Template Known Secondary structure					T	T	S																	T		T	T							.	.	.	.		T	T																T	T						T	T
Template Predicted Secondary structure																																		.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		84	.	.	.								.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.					.	.	.	.	130	.	.	.	.				.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.																																							.	.	.	.										.	.	.
Query SS confidence						.	.	.	.	.	.	.																																							.	.	.	.										.	.	.
Query Sequence		T	T	V	F	.	.	.	.	.	.	.	L	K	P	G	D	L	L	V	A	P	H	D	C	Y	G	G	S	Y	R	L	F	D	S	L	A	K	R	G	C	Y	R	V	L	F	V	D	Q	G	.	.	.	.	D	E	Q	A	L	R	A	A	L	.	.	.	A	E	K	P	K	L	V	L	V	E	S	P	S	N	P
Query Conservation						.	.	.	.	.	.	.																																							.	.	.	.										.	.	.
Alig confidence						.	.	.	.	.	.	.																																							.	.	.	.										.	.	.
Template Conservation
Template Sequence		A	E	F	L	A	R	W	Y	N	G	T	N	N	K	D	T	P	V	Y	V	S	S	P	T	W	E	N	H	N	G	V	F	T	T	A	G	F	K	D	I	R	S	Y	R	Y	W	D	T	E	K	R	G	L	D	L	Q	G	F	L	S	D	L	E	N	A	P	E	F	S	I	F	V	L	H	A	C	A	H	N	P
Template Known Secondary structure									S	S	S	S	S				S							S			T									T	T		S										T	T	T	T														S		T	T							S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		150	.	.	.	.	.				.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.												.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure								.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	R	V	V	D	.	.	.	I	A	K	I	C	H	L	A	R	E	V	G	A	V	S	V	V	D	N	T	F	L	S	P	A	L	Q	N	P	.	.	.	.	.	.	.	.	.	.	.	L	A	L	G	A	D	L	V	L	H	S	C	T	K	Y	L	N	G	H	S	D	V	V	A	G	V	V	I	A	K	D
Query Conservation								.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	G	T	D	P	T	P	E	Q	W	K	Q	I	A	S	V	M	K	R	R	F	L	F	P	F	F	D	S	A	Y	Q	G	F	A	S	G	N	L	E	K	D	A	W	A	I	R	Y	F	V	S	E	G	F	E	L	F	C	A	Q	S	F	S	K	N	F	G	L	Y	N	E	R	V	G	N	L	T	V	V	A	K
Template Known Secondary structure		T																				T								S		T	T	T	T	T	S						T									T	T										T	T	T	S			G	G	G										S
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
							216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	P	D	V	V	T	E	L	A	W	W	A	N	N	I	G	V	T	G	G	A	F	D	S	Y	L	L	L	R	G	L	R	T	L	V	P	R	M	E	L	A	Q	R	N	A	Q	A	I	V	K	Y	L	Q	T	Q	P	L	V	K	K	L	Y	H	P	S	L	P	E	N	Q	G	H	E	I	A	A
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																																		.	.	.	.
Template Conservation																																								.	.	.	.
Template Sequence		E	P	D	S	I	L	R	V	L	S	Q	M	Q	K	I	V	R	V	T	W	S	N	P	P	A	Q	G	A	R	I	V	A	R	T	L	S	D	P	.	.	.	.	E	L	F	H	E	W	T	G	N	V	K	T	M	A	D	R	I	L	S	M	R	S	E	L	R	A	R	L	E	A	L	K	T	P	G	T	W	N
Template Known Secondary structure		S																	T	T	T	S	S			S												S		.	.	.	.																															T	T		S	S
Template Predicted Secondary structure																																								.	.	.	.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.					.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.				.
Predicted Secondary structure																																																																														.	.	.
Query SS confidence																																																																														.	.	.
Query Sequence		R	Q	Q	K	G	F	G	A	M	L	S	F	E	L	D	G	D	E	Q	T	L	R	R	F	L	G	G	L	S	L	F	T	L	A	E	S	L	G	G	V	E	S	L	I	S	H	A	A	T	M	T	H	A	G	M	A	P	E	A	R	A	A	A	G	I	S	E	T	L	L	R	I	S	T	G	I	.	.	.	E
Query Conservation																																																																														.	.	.
Alig confidence																	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.
Template Conservation																	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	I	T	D	Q	I	G	M	F	S	F	T	G	L	N	.	.	.	.	.	P	K	Q	V	E	Y	L	I	N	Q	K	H	I	Y	L	L	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	I	N	M	C	G	L	T	T	K
Template Known Secondary structure								S	S								.	.	.	.	.										T	T						T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S				G	G	G			T	T
Template Predicted Secondary structure																	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.						.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.																																.	.	.	.	.	390	.	.	.	.	.
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	E	D	L	I	A	D	L	E	N	G	F	R	A	A	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	D	Y	V	A	T	S	I	H	E	A	V	T	K	I	Q
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions