Job Description P00935 Confidence 99.93% Date Wed Jan 25 15:20:10 GMT 2012 Rank 126 Aligned Residues 304 % Identity 17% Template c3nx3A_ PDB info PDB header:transferase Chain: A: PDB Molecule:acetylornithine aminotransferase; PDBTitle: crystal structure of acetylornithine aminotransferase (argd) from2 campylobacter jejuni Resolution 1.80 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.								.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.
Query Sequence		E	P	R	A	H	D	Y	S	R	R	G	N	P	T	R	D	V	V	Q	R	A	L	A	E	L	E	G	G	A	G	A	V	L	T	N	T	G	M	S	A	I	H	L	V	T	T	V	F	L	.	.	.	.	.	.	.	K	P	G	D	L	L	V	A	P	H	D	C	Y	G	G	S	Y	R	L	F	D	S	L	A
Query Conservation																																																			.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	K	L	L	H	T	S	N	L	Y	Y	N	E	N	I	A	A	A	A	K	N	L	A	K	A	S	A	L	E	R	V	F	F	T	N	S	G	T	E	S	I	E	G	A	X	K	T	A	R	K	Y	A	F	N	K	G	V	K	G	G	Q	F	I	A	F	K	H	S	F	H	G	R	T	L	G	A	L	S	L	T
Template Known Secondary structure		T	T		S				T	T	S																	T		S						S	S																			T	T		T	T							T	T					S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		113	.	.	.	.	.										.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.					.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.																																						.	.	.	.																							.	.
Query SS confidence								.	.	.	.	.	.	.	.	.																																						.	.	.	.																							.	.
Query Sequence		K	R	G	C	Y	R	.	.	.	.	.	.	.	.	.	V	L	F	V	D	Q	G	D	E	Q	A	L	R	A	A	L	A	E	K	P	K	L	V	L	V	E	S	P	S	N	P	L	L	R	V	V	D	.	.	.	.	I	A	K	I	C	H	L	A	R	E	V	G	A	V	S	V	V	D	N	T	F	L	.	.
Query Conservation								.	.	.	.	.	.	.	.	.																																						.	.	.	.																							.	.
Alig confidence								.	.	.	.	.	.	.	.	.																																						.	.	.	.																							.	.
Template Conservation
Template Sequence		A	N	E	K	Y	Q	K	P	F	K	P	L	I	S	G	V	K	F	A	K	Y	N	D	I	S	S	V	E	K	L	V	N	E	K	T	C	A	I	I	L	E	S	V	Q	G	E	G	G	I	N	P	A	N	K	D	F	Y	K	A	L	R	K	L	C	D	E	K	D	I	L	L	I	A	D	E	I	Q	C	G	X
Template Known Secondary structure								G	G	G		S			S							T	T							T	T			T	T								S				T	T	S																				T								T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
				178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	S	P	A	L	Q	N	P	L	A	L	G	A	D	L	V	L	H	S	C	T	K	Y	L	N	G	H	S	D	V	V	A	G	V	V	I	A	K	D	P	D	V	V	T	E	L	A	W	W	A	N	N	I	G	V	T	G	G	A	F	D	S	Y	L	L	L	R	G	L	R	T	L	V	P	R	M	E	L	A
Query Conservation		.	.
Alig confidence		.	.																									.	.																																														.	.
Template Conservation																												.	.																																														.	.
Template Sequence		G	R	S	G	K	F	F	A	Y	E	H	A	Q	I	L	P	D	I	X	T	S	A	K	A	L	G	.	.	C	G	L	S	V	G	A	F	V	I	N	Q	K	V	A	S	N	S	L	E	A	G	D	H	G	S	T	Y	G	G	N	P	L	V	C	A	G	V	N	A	V	F	E	I	F	.	.	K	E	E	K	I
Template Known Secondary structure		T	T	T	S	S	S	S	G	G	G	G	G	T				S						G	G	G	T	.	.	T	T	S																S		T	T			S	S		B	S																	.	.			T	T
Template Predicted Secondary structure																												.	.																																														.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.			.	.	.	300	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	N	A	Q	A	I	V	K	Y	L	Q	T	Q	P	L	V	K	K	L	Y	H	P	S	L	P	E	N	Q	G	H	E	I	A	A	R	Q	Q	K	G	F	G	A	M	L	S	F	E	L	D	G	D	E	Q	T	L	R	R	F	L	G	G	L	S	L	F	T	L	A	E	S	L	G	G	V	E	S	L	I	S
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.														.																								.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.														.																								.	.	.	.	.	.
Template Sequence		L	E	N	V	N	K	L	T	P	Y	L	E	Q	S	L	D	E	L	I	N	E	F	D	F	C	K	K	.	.	.	.	.	.	.	.	.	.	R	K	G	L	G	F	X	Q	G	L	S	L	D	.	K	S	V	K	V	A	K	V	I	Q	K	C	Q	E	N	A	L	L	L	I	S	C	G	.	.	.	.	.	.
Template Known Secondary structure																								T	T				.	.	.	.	.	.	.	.	.	.					T	T								.	T	T	S												T	T							T	.	.	.	.	.	.
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.														.																								.	.	.	.	.	.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.											.	330	.	.	.	.	.	.	.	.	.	340	.		.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	A	T	M	T	H	A	G	M	A	P	E	A	R	A	A	A	G	I	S	E	T	L	L	R	I	S	T	G	I	E	D	G	E	D	L	I	A	D	L	E	N	G	F	R	A	A	N	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	D	L	R	F	L	P	P	L	I	L	Q	K	E	H	I	D	E	X	S	E	K	L	R	K	A	L	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T								T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																							365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions