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Job DescriptionP00935
Confidence99.96%DateWed Jan 25 15:20:10 GMT 2012
Rank48Aligned Residues299
% Identity16%Templatec3nnkC_
PDB info PDB header:transferaseChain: C: PDB Molecule:ureidoglycine-glyoxylate aminotransferase; PDBTitle: biochemical and structural characterization of a ureidoglycine2 aminotransferase in the klebsiella pneumoniae uric acid catabolic3 pathway
Resolution2.58 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   46...50.........60......... 70.........80.........90.........100.........110.........120..
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Query Sequence  YSRRGNPTRDVVQRALAELEGGAG. . . AVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFV
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Template Sequence  YDPAMTHYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAIRPGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEV
Template Known Secondary structure  T
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   40.........50.........60.........70.........80.........90.........100.........110.........
 
   123.. ....130..... ....140.........150.........160.........170......... 180.........190.......
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Query Sequence  DQG. . . DEQALRAALA. EKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSP. ALQNPLALGADLVLHSCT
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Template Sequence  PWGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLGGNPLETDVWGLDAVSAG. M
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   120.........130.........140.........150.........160.........170.........180.........190....... .
 
   198.200.........210.........220 .........230.........240....
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Query Sequence  KYLNGHSDVVAGVVIAKDPDVVT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ELAWWANNIGVTGGAFDSYLLLRG
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Template Conservation 
   

 
 
 
                                       
               
       

  
Template Sequence  QCLGGPSGTSPITLSARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGAREC
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   199200.........210.........220.........230.........240.........250.........260.........270........
 
   245.. ..250.........260.........270.........280.........290.........300.........310.........
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Query Sequence  LRT. . . . . LVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLS
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Template Sequence  ARLILQEGLDYGIARHKLHGDALVKGIQAM. . . . . . . . . . . . . . . GLETFGDLKHKMNNVLGVVIPQGINGDQARKLMLE
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   280.........290.........300......... 310.........320.........330.........340....
 
   320.........330.........340.........350.........360... ......370.........380...
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Query Sequence  LFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRIS. TGIEDGEDLIADLENGFRAA
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Template Sequence  DFGIEIGTSFGP. . . . . . . . . . . . . . . . . . . . . . . LHGKVWRIGTMGYNARKDCVMTTLSALEAV
Template Known Secondary structure 
B


GG.......................GTTT

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   345....350...... ...360.........370.........380......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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