Job Description P00935 Confidence 99.88% Date Wed Jan 25 15:20:10 GMT 2012 Rank 186 Aligned Residues 283 % Identity 12% Template c3m5uA_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: crystal structure of phosphoserine aminotransferase from2 campylobacter jejuni Resolution 2.15 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		R	D	V	V	Q	R	A	L	A	E	L	E	G	G	A	.	.	.	G	A	V	L	T	N	T	G	M	S	A	I	H	L	V	T	T	V	F	L	K	P	G	D	L	L	V	A	P	H	D	C	Y	G	G	S	Y	R	L	F	D	S	L	A	K	R	G	C	Y	R	V	L	F	V	D	Q	G	D	E	Q	A	L
Query Conservation																	.	.	.
Alig confidence																	.	.	.																																						.	.
Template Conservation																																																									.	.
Template Sequence		H	F	G	A	Q	E	K	A	K	K	L	Y	E	L	N	D	D	Y	E	V	L	F	L	Q	G	G	A	S	L	Q	F	A	X	I	P	X	N	L	A	L	N	G	V	C	E	Y	A	N	T	G	V	W	T	K	K	.	.	A	I	K	E	A	Q	I	L	G	V	N	V	K	T	V	A	S	S	E	E	S	N	F
Template Known Secondary structure														T			T	T							S	S																S	S								S						.	.								T	T										T	T	T	T	S
Template Predicted Secondary structure																																																									.	.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
						131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																																																		.
Query SS confidence		.	.	.	.																																																		.
Query Sequence		.	.	.	.	R	A	A	L	A	E	K	P	K	L	V	L	V	E	S	P	S	N	P	L	L	R	V	V	D	I	A	K	I	C	H	L	A	R	E	V	G	A	V	S	V	V	D	N	T	F	L	S	P	.	A	L	Q	N	P	L	A	L	G	A	D	L	V	L	H	S	C	T	K	Y	L	N	G	H	S	D
Query Conservation		.	.	.	.																																																		.
Alig confidence		.	.	.	.																											.	.	.	.	.	.																		.									.	.
Template Conservation																																.	.	.	.	.	.																											.	.
Template Sequence		D	H	I	P	R	V	E	F	S	D	N	A	D	Y	A	Y	I	C	S	N	N	T	I	Y	G	T	Q	Y	Q	N	.	.	.	.	.	.	Y	P	K	T	K	T	P	L	I	V	D	A	S	S	D	F	F	S	R	K	V	D	F	S	N	I	.	.	A	L	F	Y	G	G	V	Q	K	N	A	G	I	S	G	L
Template Known Secondary structure			S								T	T	S	S						S			T	T	T	T				S	S	.	.	.	.	.	.					S	S							G	G	G	T	T	S	S					T	T		.	.							T	T	T	T	S	S		T	T
Template Predicted Secondary structure																																.	.	.	.	.	.																											.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.							.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.														230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Query Sequence		V	V	A	G	V	V	I	A	K	D	P	D	V	V	T	E	L	A	W	W	A	N	N	I	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	T	G	G	A	F	D	S	Y	L	L	L	R	G	L	R	T	L	V	P	R	.	.	M	E	L	A	Q	R	N	A	Q	A	I	V	K	Y	L	Q	T	Q	P
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Alig confidence							.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.																		.	.
Template Conservation							.	.	.	.																																																																						.	.
Template Sequence		S	C	I	F	I	.	.	.	.	R	K	D	X	L	E	R	S	K	N	K	Q	I	P	S	X	L	N	Y	L	T	H	A	E	N	Q	S	L	F	N	T	P	P	T	F	A	I	Y	X	F	N	L	E	X	D	W	L	L	N	Q	G	G	L	D	K	V	H	E	K	N	S	Q	K	A	T	X	L	Y	E	.	.
Template Known Secondary structure							.	.	.	.										T					G	G	G								T	T	T		S	S																			T	T	T																			.	.
Template Predicted Secondary structure							.	.	.	.																																																																						.	.
Template SS confidence
		199	200	.	.	.					.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		L	V	K	K	L	Y	H	P	S	L	P	E	N	Q	G	H	E	I	A	A	.	R	Q	Q	K	G	F	G	A	M	L	S	F	E	L	D	G	D	E	Q	T	L	R	R	F	L	G	G	L	S	L	F	T	L	A	E	S	L	G	G	V	E	S	L	I	S	H	A	A	T	M	T	H	A	G	M	A	P	E	A
Query Conservation																						.
Alig confidence		.	.	.	.	.	.	.	.													.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	C	I	D	L	S	N	G	F	Y	K	G	H	A	D	K	K	D	R	S	L	X	N	V	S	F	N	I	A	K	N	K	D	L	E	P	L	F	V	K	E	A	E	E	A	G	X	I	G	L	K	G	H	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.				T	S	T	T	S				S	S		G	G	G	B		S	S							S	S		T	T												T	T					B			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
										273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	A	A	G	I	S	E	T	L	L	R	I	S	T	G	I	E	D	G	E	D	L	I	A	D	L	E	N	G	F	R	A	A	N	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	L	G	G	I	R	A	S	I	Y	N	A	L	N	L	D	Q	V	K	T	L	C	E	F	X	K	E	F	Q	G
Template Known Secondary structure		.	.	.	.	.	.	.	T		S							T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions