Phyre 2 alignment of P00935 with c3islA

Job Description P00935
Confidence 99.95% Date Wed Jan 25 15:20:10 GMT 2012

Rank 69 Aligned Residues 316

% Identity 16% Template c3islA_

PDB info PDB header:transferase Chain: A: PDB Molecule:purine catabolism protein pucg; PDBTitle: crystal structure of ureidoglycine-glyoxylate aminotransferase (pucg)2 from bacillus subtilis

Resolution 2.06 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence	H	D	Y	S	R	R	G	N	P	T	R	D	V	V	Q	R	A	L	A	E	L	E	G	G	A	G	.	.	.	A	V	L	T	N	T	G	M	S	A	I	H	L	V	T	T	V	F	L	K	P	G	D	L	L	V	A	P	H	D	C	Y	G	G	S	Y	R	L	F	D	S	L	A	K	R	G	C	Y	R	V	L
Query Conservation																											.	.	.
Alig confidence																											.	.	.
Template Conservation
Template Sequence	G	Q	F	D	P	A	F	T	G	I	M	N	E	T	M	E	M	L	R	E	L	F	Q	T	K	N	R	W	A	Y	P	I	D	G	T	S	R	A	G	I	E	A	V	L	A	S	V	I	E	P	E	D	D	V	L	I	P	I	Y	G	R	F	G	Y	L	L	T	E	I	A	E	R	Y	G	A	N	V	H	M	L
Template Known Secondary structure		T	T	S																		T	T				S							S																T	T								S	S													T	T
Template Predicted Secondary structure
Template SS confidence
	38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.

	121	.	.	.	.				.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure						.	.	.										.																																														.
Query SS confidence						.	.	.										.																																														.
Query Sequence	F	V	D	Q	G	.	.	.	D	E	Q	A	L	R	A	A	L	.	A	E	K	P	K	L	V	L	V	E	S	P	S	N	P	L	L	R	V	V	D	I	A	K	I	C	H	L	A	R	E	V	G	A	V	S	V	V	D	N	T	F	L	S	P	.	A	L	Q	N	P	L	A	L	G	A	D	L	V	L	H	S
Query Conservation						.	.	.										.																																														.
Alig confidence						.	.	.										.																																														.
Template Conservation
Template Sequence	E	C	E	W	G	T	V	F	D	P	E	D	I	I	R	E	I	K	K	V	K	P	K	I	V	A	M	V	H	G	E	T	S	T	G	R	I	H	P	L	K	A	I	G	E	A	C	R	T	E	D	A	L	F	I	V	D	A	V	A	T	I	G	G	C	E	V	K	V	D	E	W	K	I	D	A	A	I	G	G
Template Known Secondary structure				T	T																		S						S			T	T	T	T															T	T								T	T	T	T	T	T	S				T	T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
	118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

	196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.												.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence	C	T	K	Y	L	N	G	H	S	D	V	V	A	G	V	V	I	A	K	D	P	D	V	V	T	E	L	A	W	W	A	N	N	I	G	V	T	G	G	A	F	D	S	Y	L	L	L	R	G	L	R	T	.	.	.	.	.	.	.	.	.	.	.	L	V	P	R	M	E	L	A	Q	R	N	A	Q	A	I	V	K
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.
Template Sequence	T	Q	K	C	L	S	V	P	S	G	M	A	P	I	T	Y	.	.	.	N	E	R	V	A	D	V	I	A	A	R	N	R	P	I	T	S	N	Y	F	D	L	S	Q	L	E	D	Y	W	S	E	R	R	L	N	H	H	T	E	A	T	T	M	L	Y	A	L	R	E	G	V	R	L	V	L	E	E	G	L	E	T
Template Known Secondary structure	S	S	S	T	T				S	S							.	.	.										T						S		S	T	T									T	S	T	T				S	S
Template Predicted Secondary structure																	.	.	.
Template SS confidence
	198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.				.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

	265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	Y	L	Q	T	Q	P	L	V	K	K	L	Y	H	P	S	L	P	E	N	Q	G	H	E	I	A	A	R	Q	Q	K	G	F	G	A	M	L	S	F	E	L	D	G	D	E	Q	T	L	R	R	F	L	G	G	L	S	L	F	T	L	A	E	S	L	G	G	V	E	S	L	I	S	H	A	A	T	M	T	H	A	G
Query Conservation
Alig confidence																				.																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	R	F	E	R	H	R	H	H	E	A	A	L	A	A	G	I	K	A	M	.	G	L	R	L	F	G	D	D	S	C	K	M	P	V	V	T	C	V	E	I	P	G	G	I	D	G	E	S	V	R	D	M	L	L	A	Q	F	G	I	E	I	A	S	S	F	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																			T	.	T			B		S		G	G	G	B		T	T								T	T																			B				S	T	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.

	345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.						.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.
Query SS confidence																					.	.	.	.	.
Query Sequence	M	A	P	E	A	R	A	A	A	G	I	S	E	T	L	L	R	I	S	T	.	.	.	.	.	G	I	E	D	G	E	D	L	I	A	D	L	E	N	G	F	R	A	A	N	K	G
Query Conservation																					.	.	.	.	.
Alig confidence	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template Conservation	.	.	.	.	.	.	.	.	.	.
Template Sequence	.	.	.	.	.	.	.	.	.	.	L	A	G	K	I	W	R	I	G	T	M	G	Y	S	C	R	K	E	N	V	L	F	V	L	A	G	L	E	A	V	L	L	R	H	N	A	G
Template Known Secondary structure	.	.	.	.	.	.	.	.	.	.	T	T	T	T								G	G	G		S																		T	T
Template Predicted Secondary structure	.	.	.	.	.	.	.	.	.	.
Template SS confidence
											359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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