Job Description P00935 Confidence 99.89% Date Wed Jan 25 15:20:10 GMT 2012 Rank 178 Aligned Residues 358 % Identity 11% Template c3hl2D_ PDB info PDB header:transferase Chain: D: PDB Molecule:o-phosphoseryl-trna(sec) selenium transferase; PDBTitle: the crystal structure of the human sepsecs-trnasec complex Resolution 2.81 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60					.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																					.	.	.	.									.	.	.
Query SS confidence																																																					.	.	.	.									.	.	.
Query Sequence		V	R	S	G	L	N	D	D	E	Q	Y	G	C	V	V	P	P	I	H	L	S	S	T	Y	N	F	T	G	F	N	E	P	R	A	H	D	Y	S	R	R	G	N	P	T	R	D	V	V	Q	R	A	.	.	.	.	L	A	E	L	E	G	G	A	.	.	.	G	A	V	L	T	N	T	G	M	S	A	I	H	L
Query Conservation																																																					.	.	.	.									.	.	.
Alig confidence																																																					.	.	.	.									.	.	.
Template Conservation
Template Sequence		C	G	V	G	E	R	E	G	R	V	A	S	A	L	V	A	R	R	H	Y	R	F	I	H	G	I	G	R	S	G	D	I	S	A	V	Q	P	K	A	A	G	S	S	L	L	N	K	I	T	N	S	L	V	L	D	I	I	K	L	A	G	V	H	T	V	A	N	C	F	V	V	P	M	A	T	G	M	S	L	T
Template Known Secondary structure					S	S						S								T	T	T			S		B	S	B	T	T	B	T	T	S			T	T	B																						T		T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		83	.	.	.	.	.				.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.									.	.	.	.	.	130	.	.	.	.					.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure								.	.	.						.																																.	.	.	.	.	.	.	.											.	.	.	.
Query SS confidence								.	.	.						.																																.	.	.	.	.	.	.	.											.	.	.	.
Query Sequence		V	T	T	V	F	L	.	.	.	K	P	G	D	L	.	L	V	A	P	H	D	C	Y	G	G	S	Y	R	L	F	D	S	L	A	K	R	G	C	Y	R	V	L	F	V	D	Q	.	.	.	.	.	.	.	.	G	D	E	Q	A	L	R	A	A	L	.	.	.	.	A	E	K	P	K	L	V	L	V	E	S	P
Query Conservation								.	.	.						.																																.	.	.	.	.	.	.	.											.	.	.	.
Alig confidence								.	.	.						.													.	.	.	.																.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation																													.	.	.	.
Template Sequence		L	C	F	L	T	L	R	H	K	R	P	K	A	K	Y	I	I	W	P	R	I	D	Q	K	S	C	F	.	.	.	.	K	S	M	I	T	A	G	F	E	P	V	V	I	E	N	V	L	E	G	D	E	L	R	T	D	L	K	A	V	E	A	K	V	Q	E	L	G	P	D	C	I	L	C	I	H	S	T	T	S
Template Known Secondary structure												T	T																.	.	.	.						T	T												T	T																		G	G	G								S	S
Template Predicted Secondary structure																													.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.					.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.								.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.
Query Sequence		S	N	P	L	L	R	V	V	D	I	A	K	I	C	H	L	A	R	E	V	G	A	V	S	V	V	D	N	T	F	L	S	P	A	L	Q	N	P	L	A	L	.	.	.	.	.	.	.	G	A	D	L	V	L	H	S	C	T	K	Y	L	N	G	H	S	D	V	V	A	G	V	V	I	A	K	D	P	D	V	V
Query Conservation																																											.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.																			.	.
Template Conservation																																																																				.	.
Template Sequence		C	F	A	P	R	V	P	D	R	L	E	E	L	A	V	I	C	A	N	Y	D	I	P	H	I	V	N	N	A	Y	G	V	Q	S	S	K	C	M	H	L	I	Q	Q	G	A	R	V	G	R	I	D	A	F	V	Q	S	L	D	K	N	F	M	V	P	V	G	.	.	G	A	I	I	A	G	F	N	D	S	F	I
Template Known Secondary structure				T	T	B																T								T	T		T	T															S													S				S	S	.	.							S
Template Predicted Secondary structure																																																																				.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.			.	.	.	.	.	.	.	.	300	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		T	E	L	A	W	W	A	N	N	I	G	V	T	G	G	A	F	D	S	Y	L	L	L	R	.	.	G	L	R	T	L	V	P	R	M	E	L	A	Q	R	N	A	Q	A	I	V	K	Y	L	Q	T	Q	P	L	V	K	K	L	Y	H	P	S	L	P	E	N	Q	G	H	E	I	A	A	R	Q	Q	K	G	F	G
Query Conservation																										.	.
Alig confidence																										.	.																																									.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.
Template Sequence		Q	E	I	S	K	M	Y	P	G	R	A	S	A	S	P	S	L	D	V	L	I	T	L	L	S	L	G	S	N	G	Y	K	K	L	L	K	E	R	K	E	M	F	S	Y	L	S	N	Q	I	K	K	L	S	E	A	Y	N	E	R	L	L	H	T	P	H	N	.	.	.	.	.	.	.	.	.	P	I	S	L	A
Template Known Secondary structure							T	S		S		B		S																																											T	T			B				T	T		.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.										370	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.					.	.	.	370	.	.	.
Predicted Secondary structure																																																																							.	.	.	.
Query SS confidence																																																																							.	.	.	.
Query Sequence		A	M	L	S	F	E	L	D	G	D	E	Q	T	L	R	R	F	L	G	G	L	S	L	F	T	L	A	E	S	L	G	G	V	E	S	L	I	S	H	A	A	T	M	T	H	A	G	M	A	P	E	A	R	A	A	A	G	I	S	E	T	L	L	R	I	S	T	G	I	.	.	.	.	E	D	G	E	D	L	I
Query Conservation																																																																							.	.	.	.
Alig confidence																																																					.	.	.																.	.	.	.
Template Conservation																																																					.	.	.
Template Sequence		M	T	L	K	T	L	D	E	H	R	D	K	A	V	T	Q	L	G	S	M	L	F	T	R	Q	V	S	G	A	R	V	V	P	L	G	S	M	Q	T	V	S	G	Y	T	F	R	G	F	M	S	H	.	.	.	T	N	N	Y	P	C	A	Y	L	N	A	A	S	A	I	G	M	K	M	Q	D	V	D	L	F	I
Template Known Secondary structure					T	T			T	T	T	S													T	T			S						S	S						T	T					S	T	T	T	T	.	.	.	S	S			S	S									T	T
Template Predicted Secondary structure																																																					.	.	.
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.				.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
		374	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	L	E	N	G	F	R	A	A	N	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	L	D	R	C	L	K	A	V	R	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		452	.	.	.	.	.	.	.	460	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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