Job Description P00935 Confidence 100.00% Date Wed Jan 25 15:20:10 GMT 2012 Rank 23 Aligned Residues 301 % Identity 17% Template c3fd0B_ PDB info PDB header:lyase Chain: B: PDB Molecule:putative cystathionine beta-lyase involved in aluminum PDBTitle: crystal structure of putative cystathionine beta-lyase involved in2 aluminum resistance (np_470671.1) from listeria innocua at 2.12 a3 resolution Resolution 2.12 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.								.
Predicted Secondary structure																																						.	.	.																																		.	.	.	.	.	.	.
Query SS confidence																																						.	.	.																																		.	.	.	.	.	.	.
Query Sequence		G	F	N	E	P	R	A	H	D	Y	S	R	R	G	N	P	T	R	D	V	V	Q	R	A	L	A	E	L	E	G	G	A	G	A	V	L	.	.	.	T	N	T	G	M	S	A	I	H	L	V	T	T	V	F	L	K	P	G	D	L	L	V	A	P	H	D	C	Y	G	G	S	Y	.	.	.	.	.	.	.	R
Query Conservation																																						.	.	.																																		.	.	.	.	.	.	.
Alig confidence																.	.	.																				.	.	.																																		.	.	.	.	.	.	.
Template Conservation																.	.	.
Template Sequence		H	F	N	P	S	T	G	Y	G	Y	D	D	E	G	.	.	.	R	D	T	L	E	R	V	Y	A	S	V	F	K	T	E	A	A	L	V	R	P	Q	I	I	S	G	T	H	A	I	S	T	V	L	F	G	I	L	R	P	G	D	E	L	L	Y	I	T	G	E	P	Y	D	T	L	E	E	I	V	G	I	R	S
Template Known Secondary structure		G	G					T	T		T	T				.	.	.													T		S						T	T	S		S															T	T							S	S	S			T	T						T	S	S
Template Predicted Secondary structure																.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.						.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.					.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.																						.	.	.	.																						.	.
Query SS confidence																					.	.	.	.	.																						.	.	.	.																						.	.
Query Sequence		L	F	D	S	L	A	K	R	G	C	Y	R	V	L	F	V	D	Q	G	.	.	.	.	.	D	E	Q	A	L	R	A	A	L	A	E	K	P	K	L	V	L	V	E	S	P	.	.	.	.	S	N	P	L	L	R	V	V	D	I	A	K	I	C	H	L	A	R	E	V	G	.	.	A	V	S	V	V	D	N	T
Query Conservation																					.	.	.	.	.																						.	.	.	.																						.	.
Alig confidence																					.	.	.	.	.																						.	.	.	.																						.	.
Template Conservation
Template Sequence		E	G	Q	G	S	L	K	D	F	Q	I	G	Y	D	A	V	P	L	L	P	N	G	E	I	D	Y	P	A	V	S	K	K	I	S	A	N	T	K	X	I	G	I	Q	R	S	R	G	Y	A	D	R	P	S	F	T	I	E	K	I	K	E	X	V	T	F	V	K	N	I	N	P	N	I	I	V	F	V	D	N	C
Template Known Secondary structure		S	S	S			T	G	G	G	T										T	T	S	S												T	T									S		T	T	S	S	S																				T	T	S							T
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		176	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220				.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure							.																																									.	.	.
Query SS confidence							.																																									.	.	.
Query Sequence		F	L	S	P	A	.	L	Q	N	P	L	A	L	G	A	D	L	V	L	H	S	C	T	K	Y	L	N	G	H	S	D	V	V	A	G	V	V	I	A	K	D	P	D	V	V	T	.	.	.	E	L	A	W	W	A	N	N	I	G	V	T	G	G	A	F	D	S	Y	L	L	L	R	G	L	R	T	L	V	P	R
Query Conservation							.																																									.	.	.
Alig confidence							.																			.																						.	.	.
Template Conservation																										.
Template Sequence		Y	G	E	F	V	E	R	I	E	P	T	E	V	G	A	D	I	I	A	G	S	L	I	N	.	P	G	G	G	L	A	K	T	G	G	Y	I	A	G	R	N	T	L	V	D	L	C	G	Y	R	L	T	T	P	G	I	G	R	E	A	G	A	S	L	Y	S	L	L	E	X	Y	Q	G	F	F	L	A	P	H	V
Template Known Secondary structure		T	T	T	T	T	S	S			G	G	G	T	T		S									.	T	T	T	T	T			S																			S		T	T	T	G	G	G					T	T
Template Predicted Secondary structure																										.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	L	A	Q	R	N	A	Q	A	I	V	K	Y	L	Q	T	Q	P	L	V	K	K	L	Y	H	P	S	L	P	E	N	Q	G	H	E	I	A	A	R	Q	Q	K	G	F	G	A	M	L	S	F	E	L	D	G	D	E	Q	T	L	R	R	F	L	G	G	L	S	L	F	T	L	A	E	S	L	G	G	V	E
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.
Template Sequence		T	A	Q	A	I	K	G	A	R	F	T	A	A	X	L	A	E	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	E	A	D	P	L	W	D	A	K	R	T	D	L	I	Q	S	V	S	F	H	S	K	D	K	X	I	A	F	A	Q	A	I	Q	A	A	S	P	V	N	A	H	.	.	.	.
Template Known Secondary structure																			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T					S		T	T	S			S	S	S							S															T	S	S	S	S	T	T	.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300																.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.			.	.	.	.	.	360	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		S	L	I	S	H	A	A	T	M	T	H	A	G	M	A	P	E	A	R	A	A	A	G	.	.	I	S	E	T	L	L	R	I	S
Query Conservation																									.	.
Alig confidence		.	.	.																					.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	V	L	P	I	G	A	Y	X	P	G	Y	E	D	D	V	I	X	A	A	G	T	F	I	Q	G	A	S	L	E	L	T
Template Known Secondary structure		.	.	.	S					B			T	T		S	S									S	S	T	T		S	S	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions