Job Description P00935 Confidence 99.92% Date Wed Jan 25 15:20:10 GMT 2012 Rank 144 Aligned Residues 276 % Identity 17% Template c3f9tB_ PDB info PDB header:lyase Chain: B: PDB Molecule:l-tyrosine decarboxylase mfna; PDBTitle: crystal structure of l-tyrosine decarboxylase mfna (ec 4.1.1.25)2 (np_247014.1) from methanococcus jannaschii at 2.11 a resolution Resolution 2.11 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.														90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	V	Q	R	A	L	A	E	L	E	G	G	A	.	.	G	A	V	L	T	N	T	G	M	S	A	I	H	L	V	T	T	V	F	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	D	L	L	V	A	P	H	D	C	Y	G	G	S	Y	R	L	F	D	S	L	A	K	R	G	C	Y	R	V
Query Conservation																.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation																																																																				.	.	.	.
Template Sequence		E	K	A	V	A	L	L	G	S	L	L	N	N	K	D	A	Y	G	H	I	V	S	G	G	T	E	A	N	L	X	A	L	R	C	I	K	N	I	W	R	E	K	R	R	K	G	L	S	K	N	E	H	P	K	I	I	V	P	I	T	A	H	F	S	F	E	.	.	.	.	K	G	R	E	X	X	D	L	E	Y
Template Known Secondary structure												T	T		T	T							S																							T	T					S	S							T	T			T				.	.	.	.							T
Template Predicted Secondary structure																																																																				.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.
		120	.	.	.	.	.						.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.																			.																																					.									.	.	.	.	.
Query SS confidence								.	.	.	.	.																			.																																					.									.	.	.	.	.
Query Sequence		L	F	V	D	Q	G	.	.	.	.	.	D	E	Q	A	L	R	A	A	L	A	E	K	P	K	L	V	L	V	.	E	S	P	S	N	P	L	L	R	V	V	D	I	A	K	I	C	H	L	A	R	E	V	G	A	V	S	V	V	D	N	T	F	L	S	P	.	A	L	Q	N	P	L	A	L	.	.	.	.	.
Query Conservation								.	.	.	.	.																			.																																					.									.	.	.	.	.
Alig confidence								.	.	.	.	.																			.																																					.									.	.	.	.	.
Template Conservation
Template Sequence		I	Y	A	P	I	K	E	D	Y	T	I	D	E	K	F	V	K	D	A	V	E	D	Y	D	V	D	G	I	I	G	I	A	G	T	T	E	L	G	T	I	D	N	I	E	E	L	S	K	I	A	K	E	N	N	I	Y	I	H	V	D	A	A	F	G	G	L	V	I	P	F	L	D	D	K	Y	K	K	K	G	V
Template Known Secondary structure						B		T	T	S	S	B												S									B	S		T	T	T			B														T								T	T	G	G	G	T	G	G	G			G	G	G			T	T
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
										188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.														.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	G	A	D	L	V	L	H	S	C	T	K	Y	L	N	G	H	S	D	V	V	A	G	V	V	I	A	K	D	P	D	V	V	T	E	L	A	W	W	A	N	N	I	G	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	A	F	D	S	Y	L	L	L	R	G	L	R
Query Conservation		.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																			.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.
Template Sequence		N	Y	K	F	D	F	S	L	G	V	D	S	I	T	I	D	P	H	K	X	G	H	C	P	I	P	.	.	S	G	G	I	L	F	K	D	I	G	Y	K	R	Y	L	D	V	D	A	P	Y	L	T	E	T	R	Q	A	T	I	L	G	T	R	V	G	F	G	G	A	C	T	Y	A	V	L	R	Y	L	G	R	E
Template Known Secondary structure						S	G	G	G	T		S						T	T	T	T	T				S	S	.	.							S	S	G	G	G	G	G	G	T					T	T	S	S	S	S				S	S		S	S			S
Template Predicted Secondary structure																												.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.			.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	V	P	R	M	E	L	A	Q	R	N	A	Q	A	I	V	K	Y	L	Q	T	Q	P	L	V	K	K	L	Y	H	P	S	L	P	E	N	Q	G	H	E	I	A	A	R	Q	Q	K	G	F	G	A	M	L	S	F	E	L	D	G	D	E	Q	T	L	R	R	F	L	G	G	L	S	L	F	T	L	A	E	S
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Sequence		G	Q	R	K	I	V	N	E	C	X	E	N	T	L	Y	L	Y	K	K	L	K	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	F	K	P	V	I	E	P	I	L	N	I	V	A	I	E	D	E	D	.	.	.	.	Y	K	E	V	C	K	K	L	R	D	R	G	I	Y	V	S
Template Known Secondary structure																								T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T			B	S	S			S	S	S							T	T	.	.	.	.											T	T		B
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.																			.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.					.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	G	V	E	S	L	I	S	H	A	A	T	M	T	H	A	G	M	A	P	E	A	R	A	A	A	G	I	S	E	T	L	L	R	I	S	T	G	I	E	D	G	E	D	L	I	A	D	L	E	N	G	F	R	A	A	N
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	C	N	C	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	L	R	I	V	V	X	P	H	I	K	R	E	H	I	D	N	F	I	E	I	L	N	S	I	K
Template Known Secondary structure				S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S								T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		363	.	.	.	.																											.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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