Job Description P00935 Confidence 99.95% Date Wed Jan 25 15:20:10 GMT 2012 Rank 61 Aligned Residues 298 % Identity 14% Template c3f0hA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase; PDBTitle: crystal structure of aminotransferase (rer070207000802) from2 eubacterium rectale at 1.70 a resolution Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.																																																											.	.	.
Query SS confidence																	.	.	.	.																																																											.	.	.
Query Sequence		T	R	D	V	V	Q	R	A	L	A	E	L	E	G	G	.	.	.	.	A	G	A	V	L	T	N	T	G	M	S	A	I	H	L	V	T	T	V	F	L	K	P	G	D	L	L	V	A	P	H	D	C	Y	G	G	S	Y	R	L	F	D	S	L	A	K	R	G	C	Y	R	V	L	F	V	D	Q	G	.	.	.
Query Conservation																	.	.	.	.																																																											.	.	.
Alig confidence																	.	.	.	.																																																											.	.	.
Template Conservation
Template Sequence		T	X	L	E	N	E	K	F	X	L	E	Y	A	K	A	P	E	G	S	K	A	V	F	X	T	C	S	S	T	G	S	X	E	A	V	V	X	N	C	F	T	K	K	D	K	V	L	V	I	D	G	G	S	F	G	H	R	F	V	Q	L	C	E	I	H	E	I	P	Y	V	A	L	K	L	E	H	G	K	K	L
Template Known Secondary structure															T			T	T							S	S																T	T								S	S													T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		D	E	Q	A	L	R	A	A	L	A	E	K	P	K	L	V	L	V	E	S	P	S	N	P	L	L	R	V	V	D	I	A	K	I	C	H	L	A	R	E	V	G	A	V	S	V	V	D	N	T	F	L	S	P	.	A	L	Q	N	P	L	A	L	G	A	D	L	V	L	H	S	C	T	K	Y	L	N	G	H	S
Query Conservation																																																								.
Alig confidence																																																								.
Template Conservation
Template Sequence		T	K	E	K	L	Y	E	Y	D	N	Q	N	F	T	G	L	L	V	N	V	D	E	T	S	T	A	V	L	Y	D	T	X	X	I	G	E	F	C	K	K	N	N	X	F	F	V	C	D	C	V	S	A	F	L	A	D	P	F	N	X	N	E	C	G	A	D	V	X	I	T	G	S	Q	V	L	A	C	P	P	G
Template Known Secondary structure								T	T	T	T	S									S			T	T	T	T															T	T								T	T	T	T	T	T	S								T		S													S	S
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.															230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	V	A	G	V	V	I	A	K	D	P	D	V	V	T	E	L	A	W	W	A	N	N	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	T	G	G	A	F	D	S	Y	L	L	L	R	G	L	R	T	L	V	P	R	M	E	L	A	Q	R	N	A	Q	A	I	V	K	Y	L	Q	T	Q	P
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.
Template Sequence		I	S	V	I	V	L	.	.	.	.	A	P	R	G	V	E	R	V	E	K	S	K	V	R	T	X	Y	F	D	L	K	D	A	L	K	N	Q	E	R	G	Q	T	P	F	T	P	A	V	G	I	L	L	Q	I	N	E	R	L	K	E	I	K	K	H	G	G	A	D	A	E	V	A	R	I	A	S	Q	A	A	D
Template Known Secondary structure								.	.	.	.										T						S	T	T										T	T	T			S	S																				T	T
Template Predicted Secondary structure								.	.	.	.
Template SS confidence
		195	.	.	.	.	200					.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	K	K	L	Y	H	P	S	L	P	E	N	Q	G	H	E	I	A	A	R	Q	Q	K	G	F	G	A	M	L	S	F	E	L	D	G	D	E	Q	T	L	R	R	F	L	G	G	L	S	L	F	T	L	A	E	S	L	G	G	V	E	S	L	I	S	H	A	A	T	M	T	H	A	G	M	A	P	E	A	R
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.																.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.																.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	R	A	K	I	K	D	L	P	F	E	L	V	S	.	.	.	.	.	.	.	.	E	S	P	A	N	G	V	T	S	V	H	P	T	T	A	.	N	A	Y	D	I	F	L	K	L	K	D	E	Y	G	I	W	I	C	P	N	G	G	E	X	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T	T	S	S						.	.	.	.	.	.	.	.	S	S	B	B	T	T							S	S	S	.													S	S								G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.																.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.									.	.	.	.	.	290	.	.	.	.	.	.	.	.	.		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380		.	.	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		A	A	A	G	I	S	E	T	L	L	R	I	S	T	G	I	E	D	G	E	D	L	I	A	D	L	E	N	G	F	.	R	A	A	N	K	G
Query Conservation																																.
Alig confidence		.	.	.	.	.																										.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	K	D	T	I	F	R	V	G	H	I	G	A	L	T	H	E	D	N	T	T	L	V	N	A	F	K	D	L	Q	K	R	N
Template Known Secondary structure		.	.	.	.	.	T	T	T								S	S																			T	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions