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Job DescriptionP00935
Confidence99.94%DateWed Jan 25 15:20:10 GMT 2012
Rank84Aligned Residues313
% Identity14%Templatec3e2yB_
PDB info PDB header:transferase, lyaseChain: B: PDB Molecule:kynurenine-oxoglutarate transaminase 3; PDBTitle: crystal structure of mouse kynurenine aminotransferase iii in complex2 with glutamine
Resolution2.26 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   48.50... ......60...... ...70.........80.........90.........100.........110.......
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Query Sequence  RRGNPT. RDVVQRALAELEG. . . . . . . . . GAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCY
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Template Sequence  QYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVF
Template Known Secondary structure  S


TT

TS


TTTSS

TT
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TTTT
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   97..100.........110.........120.........130.........140.........150.........160.........170......
 
   118.120.... .....130.........140.........150..... ....160.........170.........180..
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Query Sequence  RVLFVDQ. . . . . . . . . . . . GDEQALRAALAEKPKLVLVESPSNPLLRVVD. . . IAKICHLAREVGAVSVVDNTFLSPALQ
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Template Sequence  IPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYT
Template Known Secondary structure 




SS

BGGG



TTSS
TTT




T

TTTT
B
T
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   177..180.........190.........200.........210.........220.........230.........240.........250......
 
   183.. ....190.........200.........210.........220.........230.........240.........250.....
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Query Sequence  NPL. . . . . . . ALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRTLVPRMELA
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Template Sequence  GHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDP
Template Known Secondary structure  T




GGGSTTTGGGSS
GGG



TTT



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   257..260.........270.........280.........290.........300.........310.........320.........330......
 
   256...260.........270.........280.........290.........300...... ...310.........320....
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Query Sequence  QRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG. . . . . . . . . . . DEQTLRRFLGGLSLFTLA
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Template Sequence  ECYFNSLPKELEVK. . . RDRMVRLLNSVGLKPI. . . . VPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLT
Template Known Secondary structure  TS...TTT
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SBSS
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   337..340.........350 .........360...... ...370.........380.........390.........400.........
 
   325....330.........340.........350.........360.........370.........380.....
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Query Sequence  ESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAANK
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Template Sequence  AIPVSAFCDSKSKPHF. . . . . . . . . . . . . . . . EKLVRFCFI. . KKDSTLDAAEEIFRAWNQ
Template Known Secondary structure 
GGGGS
TTT................TT

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   410.........420..... ....430.... .....440.........450..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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