Job Description P00935 Confidence 99.81% Date Wed Jan 25 15:20:10 GMT 2012 Rank 216 Aligned Residues 304 % Identity 10% Template c3dodA_ PDB info PDB header:transferase Chain: A: PDB Molecule:adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PDBTitle: crystal structure of plp bound 7,8-diaminopelargonic acid synthase in2 bacillus subtilis Resolution 1.90 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.								.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.																	.	.	.	.	.	.	.
Query SS confidence																						.	.																	.	.	.	.	.	.	.
Query Sequence		R	G	N	P	T	R	D	V	V	Q	R	A	L	A	E	L	E	G	G	A	.	.	G	A	V	L	T	N	T	G	M	S	A	I	H	L	V	T	.	.	.	.	.	.	.	T	V	F	L	K	P	G	D	L	L	V	A	P	H	D	C	Y	G	G	S	Y	R	L	F	D	S	L	A	K	R	G	C	Y	R	V
Query Conservation																						.	.																	.	.	.	.	.	.	.
Alig confidence																						.	.																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	T	N	V	P	A	T	Q	L	A	E	T	L	I	D	I	S	P	K	K	L	T	R	V	F	Y	S	D	S	G	A	E	A	M	E	I	A	L	K	M	A	F	Q	Y	W	K	N	I	G	K	P	E	K	Q	K	F	I	A	M	K	S	Y	K	A	P	I	P	Y	V	Y	R	S	E	S	G	D	P	D	E	C
Template Known Secondary structure		S																S		T	T								S	S																			T	T		T	T																		T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.					.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																												.											.	.	.	.																							.	.	.	.
Query SS confidence																												.											.	.	.	.																							.	.	.	.
Query Sequence		L	F	V	D	Q	G	D	E	Q	A	L	R	A	A	L	A	E	K	P	K	L	V	L	V	E	S	.	P	S	N	P	L	L	R	V	V	D	.	.	.	.	I	A	K	I	C	H	L	A	R	E	V	G	A	V	S	V	V	D	N	T	F	L	.	.	.	.	S	P	A	L	Q	N	P	L	A	L	G	A	D
Query Conservation																												.											.	.	.	.																							.	.	.	.
Alig confidence																												.											.	.	.	.																							.	.	.	.
Template Conservation
Template Sequence		R	D	Q	C	L	R	E	L	A	Q	L	L	E	E	H	H	E	E	I	A	A	L	S	I	E	S	M	V	Q	G	A	S	G	M	I	V	M	P	E	G	Y	L	A	G	V	R	E	L	C	T	T	Y	D	V	L	M	I	V	D	E	V	A	T	G	F	G	R	T	G	K	M	F	A	C	E	H	E	N	V	Q
Template Known Secondary structure																	G	G	G								S	S			S	T	T	T						T	T												T	T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.						230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.
Query SS confidence																																									.	.	.	.	.
Query Sequence		L	V	L	H	S	C	T	K	Y	L	N	G	H	S	D	V	V	A	G	V	V	I	A	K	D	P	D	V	V	T	E	L	A	W	W	A	N	N	I	.	.	.	.	.	G	V	T	G	G	A	F	D	S	Y	L	L	L	R	G	L	R	T	L	V	P	R	M	E	L	A	Q	R	N	A	Q	A	I	V	K	Y
Query Conservation																																									.	.	.	.	.
Alig confidence																								.	.																.	.	.	.	.
Template Conservation																								.	.
Template Sequence		P	D	L	M	A	A	G	K	G	I	T	G	G	Y	L	P	I	A	V	T	F	A	.	.	T	E	D	I	Y	K	A	F	Y	D	D	Y	E	N	L	K	T	F	F	H	G	H	S	Y	T	G	N	Q	L	G	C	A	V	A	L	E	N	L	A	L	F	E	S	E	N	I	V	E	Q	V	A	E	K	S	K	K
Template Known Secondary structure			S						G	G	G	G	T	T	S	S								.	.							T	T		S		G	G	G									T	T	T	T																		T	T
Template Predicted Secondary structure																								.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.			.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	T	Q	P	L	V	K	K	L	Y	H	P	S	L	P	E	N	Q	G	H	E	I	A	A	R	Q	Q	K	G	F	G	A	M	L	S	F	E	L	D	G	D	E	Q	T	L	R	R	F	L	G	G	L	S	L	F	T	L	A	E	S	L	G	G	V	E	S	L	I	S	H	A	A	T	M	T	H	A	G	M
Query Conservation
Alig confidence											.																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	H	F	L	L	Q	D	L	H	.	A	L	P	H	V	G	D	I	R	Q	L	G	F	M	C	G	A	E	L	V	R	S	K	E	T	K	E	P	Y	P	A	D	R	R	I	G	Y	K	V	S	L	K	M	R	E	L	G	M	L	T	R	P	L	G	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	.	T	S	T	T								T	T								S	B	T	T	T	T	B				G	G	G													T	T							T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		351	.	.	.	.	.	.	.	.		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	E	A	R	A	A	A	G	I	S	E	T	L	L	R	I	S	T	G	I	E	D	G	E	D	L	I	A	D	L	E	N	G	F	R	A	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	F	L	P	P	L	A	S	T	A	E	E	L	S	E	M	V	A	I	M	K	Q	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions