Return to main results Retrieve Phyre Job Id

Job DescriptionP00935
Confidence28.14%DateWed Jan 25 15:20:10 GMT 2012
Rank399Aligned Residues103
% Identity16%Templatec3bijC_
PDB info PDB header:structural genomics, unknown functionChain: C: PDB Molecule:uncharacterized protein gsu0716; PDBTitle: crystal structure of protein gsu0716 from geobacter2 sulfurreducens. northeast structural genomics target gsr13
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   54.....60.........70...... ...80....... ..90.........100.........110.........120........
Predicted Secondary structure 





.....

















Query SS confidence 






















. .










. . .








































Query Sequence  RDVVQRALAELEGGAGAVLTNTG. . MSAIHLVTTVF. . . LKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQ
Query Conservation     

   
   
 
  
   

..  

   
 

...   

 

                           
  
  
Alig confidence 










.










..










...













.






















...
Template Conservation 
  
   
   .
  
  
    

   
   
  
       
 
 





.
                     
...
Template Sequence  AEDXAAIAAER. GFAVTTLXTKAATRAKVIDAIGKAAKALGKGDIFXLSYSGH. GGQVPDTSNDEPDGVDETWCLFD. . .
Template Known Secondary structure  T.TGGG



TT
S
.
TT


TT

SS...
Template Predicted Secondary structure 
.















.




















...
Template SS confidence 















































































   33......40... ......50.........60.........70.........80.... .....90.........100.......
 
   129130.........140.........150.........160.........170.........180
Predicted Secondary structure 






















Query SS confidence 



















































Query Sequence  ALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPA
Query Conservation   
          
      
  
    
  
  

   
  



 
 
 
 
Alig confidence  ...................
































Template Conservation  ...................  
    
   
  
     
 



 
 

  
Template Sequence  . . . . . . . . . . . . . . . . . . . GELIDDELYALLGKFAAGVRVLVFSDSCHSGTV
Template Known Secondary structure  ...................STTS
SS






Template Predicted Secondary structure  ...................















Template SS confidence 



















































   108.110.........120.........130.........140
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions