Return to main results Retrieve Phyre Job Id

Job DescriptionP21338
Confidence100.00%DateThu Jan 5 11:38:03 GMT 2012
Rank8Aligned Residues181
% Identity24%Templated1ucda_
SCOP infoRibonuclease Rh-like Ribonuclease Rh-like Ribonuclease Rh-like
Resolution1.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.........70.........80.........90.........100.........110...
Predicted Secondary structure 






























































Query SS confidence 















































































Query Sequence  FDRYVLALSWQTGFCQSQHDRNRNERDECRLQTETTNKADFLTVHGLWPGLPKSVAARGVDERRWMRFGCATRPIPNLPE
Query Conservation 

 






 



             
            







    
               
          
Alig confidence 




















...........































................
Template Conservation 

   


 
 
 

      ...........         







         
     ................
Template Sequence  FDSFWFVQQWPPAVCSFQKSG. . . . . . . . . . . SCPGSGLRTFTIHGLWPQQSGTSLTNCPGSPF. . . . . . . . . . . . . . . .
Template Known Secondary structure 


T

SS...........

GGGG

S
TT

S
S



................
Template Predicted Secondary structure 










...........


























................
Template SS confidence 















































































   1........10.........20. ........30.........40.........50...
 
   114.....120.........130.........140. ........150......... 160.........170.........180.... ....
Predicted Secondary structure 












..








..






.

Query SS confidence 



























. .

















. .
























.



Query Sequence  ARASRMCSSPETGLSLETAAKLSEVMPG. . AGGRSCLERYEYAKHGAC. . FGFDPDAYFGTMVRLNQEIKESEAG. KFLA
Query Conservation               
       
   

 ..      

 


 




..       

  

 
    
     .    
Alig confidence  ..........

















..

















..
























.



Template Conservation  ..........           
   

         

 


 




         

  
  
    
    
    
Template Sequence  . . . . . . . . . . DITKISHLQSQLNTLWPNVLRANNQQFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNNYDIIGALRPHAA
Template Known Secondary structure  ..........
GGGGGGGS

SSSS
TGGGGTTT

T

GGGT
Template Predicted Secondary structure  ..........
























Template SS confidence 















































































   54.....60.........70.........80.........90.........100.........110.........120...
 
   189190.........200.........210.........220 .........230.........240.........250.........260...
Predicted Secondary structure 















....





















Query SS confidence 































. . . .










































Query Sequence  DNYGKTVSRRDFDAAFAKSWGKENVKAVKLTC. . . . QGNPAYLTEIQISIKADAINAPLSANSFLPQPHPGNCGKTFVI
Query Conservation     
       
  

  
 
      
 
 
....  
   
 

 
 
  
                   

    
Alig confidence 





















....





....


















.......





.









Template Conservation   
         
  

    
 ....     
          
 

 

      .......    
 .   

    
Template Sequence  GPNGRTKSRQAIKGFLKAKFGK. . . . FPGLRCRTDPQTKVSYLVQVVACFAQDGS. . . . . . . TLIDCT. RDTCGANFIF
Template Known Secondary structure  S
SSSSS....


TTT

TTSS.......S


.




S
Template Predicted Secondary structure 










....











.......





.







Template SS confidence 














































































   124.....130.........140..... ....150.........160.........170.... .....180 .........190
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions