Job Description P21338 Confidence 7.78% Date Thu Jan 5 11:38:03 GMT 2012 Rank 29 Aligned Residues 60 % Identity 15% Template c4a17R_ PDB info PDB header:ribosome Chain: R: PDB Molecule:rpl23a; PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 2. Resolution 3.52 Å

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		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	M	V	R	L	N	Q	E	I	K	E	S	E	A	G	K	F	L	A	D	N	Y	G	K	T	V	S	R	R	D	F	D	A	A	F	A	K	S	W	G	K	E	N	V	K	A	V	K	L	T	C	Q	G	N	P	A	Y	L	T	E	I	Q	I	S	I	K	A	D
Query Conservation
Alig confidence															.	.	.								.	.	.																														.	.	.
Template Conservation															.	.	.								.	.	.																														.	.	.
Template Sequence		E	K	A	M	K	K	M	E	D	E	N	T	M	.	.	.	V	F	Y	V	H	N	R	.	.	.	S	T	K	P	Q	I	K	S	A	F	E	K	L	Y	N	V	K	V	R	S	V	N	T	L	N	T	I	T	G	.	.	.	N	K	K	A	Y	I	R	L	A	A	D
Template Known Secondary structure											S	S			.	.	.						T	T	.	.	.																											T	T	S	.	.	.										S	S
Template Predicted Secondary structure															.	.	.								.	.	.																														.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.				.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions