Job Description P21338 Confidence 2.79% Date Thu Jan 5 11:38:03 GMT 2012 Rank 81 Aligned Residues 48 % Identity 17% Template c1o8tA_ PDB info PDB header:lipid transport Chain: A: PDB Molecule:apolipoprotein c-ii; PDBTitle: global structure and dynamics of human apolipoprotein cii2 in complex with micelles: evidence for increased mobility3 of the helix involvved in the activation of lipoprotein4 lipase. Resolution UNK

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		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	M	C	S	S	P	E	T	G	L	S	L	E	T	A	A	K	L	S	E	V	M	P	G	A	G	G	R	S	C	L	E	R	Y	E	Y	A	K	H	G	A	C	F	G	F	D	P	D	A	Y	F	G	T	M	V	R	L	N	Q	E	I	K	E	S	E	A	G	K	F	L	A	D
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	Q	Q	D	E	M	P	S	P	T	F	L	T	Q	V	K	E	S	L	S	S	Y	W	E	S	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	A	Q	N	L	Y	E	K	T	Y	L	P	A	V	D	E	K	L	R	D
Template Known Secondary structure				S	S	S	S																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30																										.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions