Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGA6
Confidence85.90%DateThu Jan 5 11:28:37 GMT 2012
Rank280Aligned Residues35
% Identity20%Templated3c07a1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Tetracyclin repressor-like, N-terminal domain
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   151........160.........170.........180.........190....
Predicted Secondary structure 











Query SS confidence 











































Query Sequence  QGMAVKEIAAELGLSPKTVHVHRANLMEKLGVSNDVELARRMFD
Query Conservation   
 
  


  
 

  

  
   
  

 
  
 

   
  
Alig confidence 





















.........












Template Conservation     

  

  



    
  .........
 

  
   
  
Template Sequence  DRTTXRAIAQEAGVSVGNAYYY. . . . . . . . . FAGKEHLIQGFYD
Template Known Secondary structure  TT

TS
.........
SS
Template Predicted Secondary structure 




.........

Template SS confidence 











































   38.40.........50......... 60.........70..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions