 |
Job Description | P0AGA6 | Confidence | 79.54% | Date | Thu Jan 5 11:28:37 GMT 2012 |
Rank | 382 | Aligned Residues | 42 |
% Identity | 7% | Template | d2g7ga1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| Tetracyclin repressor-like, N-terminal domain
|
Resolution | 2.01 |
|
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | Q | V | A | E | K | L | A | Q | G | M | A | V | K | E | I | A | A | E | L | G | L | S | P | K | T | V | H | V | H | R | A | N | L | M | E | K | L | G | V | S | N | D | V | E | L | A | R | R | M | F | D |
Query Conservation |   |
  |   |
|
|   |   |   |   |   |
|   |
|   |   |
|
|
|   |   |
|   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|
|   |
|   |   |
|   |
|
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |
| . |   |   |
|   |   |   |
|
|   |   |
|
|
|
|   |   |
|
|
|   |   | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |
|   |   |   |
|   |   |
Template Sequence |   |
L | E | L | V | D | R | D | G | . |
D | F | R | X | P | D | L | A | R | H | L | N | V | Q | V | S | S | I | Y | H | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
A | K | G | R | A | A | V | V | E | L | V | R | H |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | S | . | S |
|
|  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  | T | T | . | . | . | . | . | . | . | . | . | S |
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
| . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
19 | 20 | . | . | . | . | . | . | |
. | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | 50 | . | . | . | . | . | . | . | . | . | 60 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|