Job Description P0AGA6 Confidence 97.96% Date Thu Jan 5 11:28:37 GMT 2012 Rank 133 Aligned Residues 60 % Identity 12% Template d1ttya_ SCOP info DNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma4 domain Resolution UNK

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		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150						.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.
Query SS confidence																	.	.	.	.	.
Query Sequence		D	P	L	T	K	R	E	R	Q	V	A	E	K	L	A	.	.	.	.	.	Q	G	M	A	V	K	E	I	A	A	E	L	G	L	S	P	K	T	V	H	V	H	R	A	N	L	M	E	K	L	G	V	S	N	D	V	E	L	A	R	R	M	F	D	G
Query Conservation																	.	.	.	.	.
Alig confidence																	.	.	.	.	.
Template Conservation
Template Sequence		K	T	L	S	P	R	E	A	M	V	L	R	M	R	Y	G	L	L	D	G	K	P	K	T	L	E	E	V	G	Q	Y	F	N	V	T	R	E	R	I	R	Q	I	E	V	K	A	L	R	K	L	R	H	P	S	R	S	K	Y	L	K	S	L	L	S	L
Template Known Secondary structure		T	T	S													T	T	T	T	S	S												T																		B	T	T	B	S	S
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions