Job Description P0AGA6 Confidence 98.75% Date Thu Jan 5 11:28:37 GMT 2012
Rank 128 Aligned Residues 110
% Identity 20% Template c3h5iA_
PDB info
PDB header: transcriptionChain: A: PDB Molecule: response regulator/sensory box protein/ggdef
PDBTitle: crystal structure of the n-terminal domain of a response2 regulator/sensory box/ggdef 3-domain protein from3 carboxydothermus hydrogenoformans
Resolution 1.90 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
3 . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . .
. 50 . . . . . . . . .
60 . . . . . . . . . 70 . .
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Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
T V A L I D D H L I V R S G F A Q L L G L E P D L Q V V A E F G S G R E A L A G L P G R G V .
Q V C I C D I S M P D .
I S G L E L L S Q L P K G .
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M A T I M L
Query Conservation  
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Alig confidence  
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Template Conservation  
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Template Sequence  
K I L I V E D S K F Q A K T I A N I L N K Y G .
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Y T V E I A L T G E A A V E K V S G G W Y P D L I L M D I E L G E G M D G V Q T A L A I Q Q I S E L P V V F L
Template Known Secondary structure  
S T T . . S S T T S S S S S S
Template Predicted Secondary structure  
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Template SS confidence  
   
5 . . . . 10 . . . . . . . . . 20 . . . . . . .
. . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . .
 
   
79 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
S V H D S P A L V E Q A L N A G A R G F L S K R C S P D E L I A A V H T
Query Conservation  
                                                                       
Alig confidence  
Template Conservation  
                                                         
Template Sequence  
T A H T E P A V V E K I R S V T A Y G Y V M K S A T E Q V L I T I V E M
Template Known Secondary structure  
S S S S G G G G G S T T
Template Predicted Secondary structure  
Template SS confidence  
   
83 . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]