Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGA6
Confidence76.57%DateThu Jan 5 11:28:37 GMT 2012
Rank411Aligned Residues42
% Identity17%Templatec3boqB_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:transcriptional regulator, marr family; PDBTitle: crystal structure of marr family transcriptional regulator from2 silicibacter pomeroyi
Resolution2.39 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   138.140.........150. ........160.........170.........
Predicted Secondary structure 








...





Query SS confidence 













. . .



























Query Sequence  LTKRERQVAEKLAQ. . . GMAVKEIAAELGLSPKTVHVHRANLMEK
Query Conservation 

 

  

     ...
 
  


  
 

  

  
   
  
Alig confidence 













...



























Template Conservation 

  
  

  
       
  


        


  
 


  
Template Sequence  LSLAKFDAXAQLARNPDGLSXGKLSGALKVTNGNVSGLVNRLIKD
Template Known Secondary structure 


TT

SS

S
T
Template Predicted Secondary structure 









Template SS confidence 












































   42.......50.........60.........70.........80......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions