Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGA6
Confidence75.71%DateThu Jan 5 11:28:37 GMT 2012
Rank416Aligned Residues37
% Identity27%Templatec2xroE_
PDB info PDB header:dna-binding protein/dnaChain: E: PDB Molecule:hth-type transcriptional regulator ttgv; PDBTitle: crystal structure of ttgv in complex with its dna operator
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   140.........150 .........160.........170......
Predicted Secondary structure 






...





Query SS confidence 










. . .

























Query Sequence  KRERQVAEKLA. . . QGMAVKEIAAELGLSPKTVHVHRANL
Query Conservation   

  

    ... 
 
  


  
 

  

  
   
Alig confidence 










...

























Template Conservation   
 
 

  
        
 


  


  


 


 

Template Sequence  ARAASIMRALGSHPHGLSLAAIAQLVGLPRSTVQRIINAL
Template Known Secondary structure 
TT
B
SS

Template Predicted Secondary structure 









Template SS confidence 







































   18.20.........30.........40.........50.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions