Job Description P77199 Confidence 92.52% Date Thu Jan 5 12:26:15 GMT 2012 Rank 36 Aligned Residues 186 % Identity 16% Template d2zfga1 SCOP info Transmembrane beta-barrels Porins Porin Resolution 1.59

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		753	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	A	A	G	F	A	K	G	D	M	N	D	R	S	G	Q	V	D	Q	D	S	Q	T	A	Y	I	Y	S	S	A	H	F	A	N	N	V	F	V	D	G	S	L	S	Y	S	H	F	N	N	D	L	S	A	T	M	S	N	G	T	Y	V	D	G	S	T	N	S	D	A	W	G	F	G	L	K	A	G	Y	D
Query Conservation
Alig confidence																																			.																												.	.	.
Template Conservation																																			.																												.	.	.
Template Sequence		G	L	N	F	A	V	Q	Y	L	G	K	N	E	R	D	T	A	R	R	S	N	G	D	G	V	G	G	S	I	S	Y	E	Y	.	E	G	F	G	I	V	G	A	Y	G	A	A	D	R	T	N	L	Q	E	A	Q	P	L	G	N	G	K	.	.	.	K	A	E	Q	W	A	T	G	L	K	Y	D	A	N	N	I
Template Known Secondary structure		T											B			S	S	S	T	T		B													.	T	T																		T	S	S	B				S	.	.	.														T	T
Template Predicted Secondary structure																																			.																												.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.				210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		833	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	L	G	D	A	G	Y	V	T	P	Y	G	S	V	S	G	L	F	Q	S	G	D	D	Y	Q	L	S	N	D	M	K	V	D	G	Q	S	Y	D	S	M	R	Y	E	L	G	V	D	A	G	Y	T	F	T	Y	S	E	D	Q	A	L	T	P	Y	F	K	L	A	Y	V	Y	D	D	S	N	N	D	N	D	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																						.	.							.	.	.	.																	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																																						.	.							.	.	.	.																	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	Y	L	A	A	N	Y	G	E	T	R	N	A	T	P	I	T	N	K	F	T	N	T	S	G	F	A	N	K	T	Q	D	V	L	L	V	A	Q	.	.	Y	Q	F	D	F	G	.	.	.	.	L	R	P	S	I	A	Y	T	K	S	K	A	K	D	V	E	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.											S		S					T	T	T	T						S											.	.				T	T	S	.	.	.	.																T	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																						.	.							.	.	.	.																	.	.	.	.
Template SS confidence
													226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.			.	.	.	.	.	.					.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		913	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.						.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.
Query SS confidence																																										.	.	.	.	.
Query Sequence		N	G	D	S	I	D	N	G	T	E	G	S	A	V	R	V	G	L	G	T	Q	F	S	F	T	K	N	F	S	A	Y	T	D	A	N	Y	L	G	G	G	.	.	.	.	.	D	V	D	Q	D	W	S	A	N	V	G	V	K	Y	T	W
Query Conservation																																										.	.	.	.	.
Alig confidence		.	.	.	.	.																																				.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	G	I	G	D	V	D	L	V	N	Y	F	E	V	G	A	T	Y	Y	F	N	K	N	M	S	T	Y	V	D	Y	I	I	N	Q	I	D	S	D	N	K	L	G	V	G	S	D	D	T	V	A	V	G	I	V	Y	Q	F
Template Known Secondary structure		.	.	.	.	.	T	T																			T	T														T	T		T	T					B
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions