Job Description P77199 Confidence 84.98% Date Thu Jan 5 12:26:15 GMT 2012 Rank 41 Aligned Residues 181 % Identity 18% Template d1phoa_ SCOP info Transmembrane beta-barrels Porins Porin Resolution 3.00

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		712	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	Y	F	G	G	N	F	N	G	D	N	G	T	I	N	Y	D	Q	D	V	N	G	I	M	V	G	V	D	T	K	I	D	G	N	N	A	K	W	I	V	G	A	A	A	G	F	A	K	G	D	M	N	D	R	S	G	Q	V	D	Q	D	S	Q	T	A	Y	I	Y	S	S	A	H	F	A	N	N	V	F	V
Query Conservation
Alig confidence																																																																														.	.	.
Template Conservation																																																																														.	.	.
Template Sequence		L	N	L	T	L	Q	Y	Q	G	K	N	E	N	R	D	V	K	K	Q	N	G	D	G	F	G	T	S	L	T	Y	D	F	G	G	S	D	F	A	I	S	G	A	Y	T	N	S	D	R	T	N	E	Q	N	L	Q	S	R	G	T	G	K	R	A	E	A	W	A	T	G	L	K	Y	D	A	N	N	.	.	.	I
Template Known Secondary structure												B		S	S		S	T	T		B		S											T	T	T	T														G	G	G	T	T	S	S	S	S		S	S														T	T	.	.	.
Template Predicted Secondary structure																																																																														.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.				.
		792	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	S	L	S	Y	S	H	F	N	N	D	L	S	A	T	M	S	N	G	T	Y	V	D	G	S	T	N	S	D	A	W	G	F	G	L	K	A	G	Y	D	F	K	L	G	D	A	G	Y	V	T	P	Y	G	S	V	S	G	L	F	Q	S	G	D	D	Y	Q	L	S	N	D	M	K	V	D	G	Q	S	Y	D
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.														.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.														.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	A	T	F	Y	S	E	T	R	K	M	T	P	I	T	G	G	F	A	N	K	T	Q	N	.	.	.	.	.	.	.	.	.	.	F	E	A	V	A	Q	Y	Q	F	D	F	G	L	.	.	R	P	S	L	G	Y	V	L	S	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												S		S			S	S	S	S		S					.	.	.	.	.	.	.	.	.	.										S	S	S		.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.														.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250											.	.	.	.	.	.	.	.	.	260	.	.	.			.	.	.	.	.	.	270	.	.	.	.
		872	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	R	Y	E	L	G	V	D	A	G	Y	T	F	T	Y	S	E	D	Q	A	L	T	P	Y	F	K	L	A	Y	V	Y	D	D	S	N	N	D	N	D	V	N	G	D	S	I	D	N	G	T	E	G	S	A	V	R	V	G	L	G	T	Q	F	S	F	T	K	N	F	S	A	Y	T	D	A	N	Y	L	G	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	I	E	G	I	G	D	E	D	L	V	N	Y	I	D	V	G	A	T	Y	Y	F	N	K	N	M	S	A	F	V	D	Y	K	I	N	Q	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	B	T	T	T	B																S	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																												281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		952	.						.	.	.	.	.	.	960	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.
Query SS confidence				.	.	.	.	.
Query Sequence		G	D	.	.	.	.	.	V	D	Q	D	W	S	A	N	V	G	V	K	Y	T	W
Query Conservation				.	.	.	.	.
Alig confidence				.	.	.	.	.
Template Conservation
Template Sequence		D	S	D	N	K	L	N	I	N	N	D	D	I	V	A	V	G	M	T	Y	Q	F
Template Known Secondary structure			S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions