Job Description P77199 Confidence 99.14% Date Thu Jan 5 12:26:15 GMT 2012 Rank 10 Aligned Residues 150 % Identity 19% Template d1p4ta_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution 2.55

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		784	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	F	A	N	N	V	F	V	D	G	S	L	S	Y	S	H	F	N	N	D	L	S	A	T	M	S	N	G	T	Y	V	D	G	S	T	N	S	D	A	W	G	F	G	L	K	A	G	Y	D	F	K	L	G	D	A	G	Y	V	T	P	Y	G	S	V	S	G	L	F	Q	S	G	D	D	Y	Q	L	S	N	D	M
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.							.	.	.	.											.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.							.	.	.	.											.	.	.	.	.	.	.
Template Sequence		E	G	A	S	G	F	Y	V	Q	A	D	A	A	H	A	K	A	S	S	S	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	K	G	F	S	P	R	I	S	A	G	Y	R	I	.	.	.	N	D	L	R	F	A	.	.	.	.	V	D	Y	T	R	Y	K	N	Y	K	.	.	.	.	.	.	.
Template Known Secondary structure																					S	S		.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	T	T					.	.	.	.									S	S	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.							.	.	.	.											.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.														.	.	.	.	.	.	.	30	.	.	.	.	.	.	.				.	.	40	.	.	.					.	.	.	.	.	.	50	.	.	.
		864	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	D	G	Q	S	Y	D	S	M	R	Y	E	L	G	V	D	A	G	Y	T	F	T	Y	S	E	D	Q	A	L	T	P	Y	F	K	L	A	Y	V	Y	D	D	S	N	N	D	N	D	V	N	G	D	S	I	D	N	G	T	E	G	S	A	V	R	V	G	L	G	T	Q	F	S	F	T	K	N	F	S	A	Y
Query Conservation
Alig confidence		.	.	.																									.	.																											.	.	.
Template Conservation		.	.	.																									.	.																											.	.	.
Template Sequence		.	.	.	A	P	S	T	D	F	K	L	Y	S	I	G	A	S	A	I	Y	D	F	D	T	Q	S	P	.	.	V	K	P	Y	L	G	A	R	L	S	L	N	R	A	S	V	D	L	G	G	S	D	S	F	S	Q	.	.	.	T	S	I	G	L	G	V	L	T	G	V	S	Y	A	V	T	P	N	V	D	L	D
Template Known Secondary structure		.	.	.			S	S																		S	S	S	.	.																			T	T							.	.	.																	T	T
Template Predicted Secondary structure		.	.	.																									.	.																											.	.	.
Template SS confidence
					54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		944	.	.	.	.	.	950	.	.	.	.	.	.	.						.	.	960	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.
Query SS confidence																.	.	.	.	.
Query Sequence		T	D	A	N	Y	L	G	G	G	D	V	D	Q	D	.	.	.	.	.	W	S	A	N	V	G	V	K	Y	T	W
Query Conservation																.	.	.	.	.
Alig confidence																.	.	.	.	.
Template Conservation
Template Sequence		A	G	Y	R	Y	N	Y	I	G	K	V	N	T	V	K	N	V	R	S	G	E	L	S	A	G	V	R	V	K	F
Template Known Secondary structure													T	T
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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