Job Description P77199 Confidence 92.94% Date Thu Jan 5 12:26:15 GMT 2012 Rank 35 Aligned Residues 510 % Identity 10% Template d1daba_ SCOP info Single-stranded right-handed beta-helix Pectin lyase-like Virulence factor P.69 pertactin Resolution 2.50

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		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.					.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.
Query SS confidence																																																							.	.	.	.
Query Sequence		N	T	T	I	D	D	D	Y	E	A	L	Y	F	T	D	S	Y	K	D	G	D	V	T	K	H	T	N	E	T	F	D	T	S	E	G	V	A	V	N	L	D	V	E	S	N	I	N	I	S	N	N	S	R	.	.	.	.	V	A	G	I	A	L	S	Q	G	N	T	Y	N	E	T	Y	T	T	E	S	H	T	W
Query Conservation																																																							.	.	.	.
Alig confidence																																																							.	.	.	.
Template Conservation
Template Sequence		G	G	V	R	T	A	S	G	T	T	I	K	V	S	G	R	Q	A	Q	G	I	L	L	E	N	P	A	A	E	L	Q	F	R	N	G	S	V	T	S	S	G	Q	L	S	D	D	G	I	R	R	F	L	G	T	V	T	V	K	A	G	K	L	V	A	D	H	A	T	L	A	N	V	G	D	T	W	D	D	D	G
Template Known Secondary structure									S							S	T	T			S														S							S			B		S	S	S	S		B			S												S							S		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	N	I	S	V	K	D	S	T	V	T	S	G	S	N	Y	I	L	D	S	N	T	Y	G	K	T	G	H	F	G	N	S	D	E	P	S	D	Y	A	G	P	G	D	V	A	M	S	F	T	A	S	G	S	D	Y	A	M	K	N	N	V	F	L	S	N	S	T	L	M	G	D	V	A	F	T	S	T	W	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	L	Y	V	A	G	E	Q	A	Q	A	S	I	A	D	S	T	L	Q	G	A	G	G	V	Q	I	E	R	G	A	N	V	T	V	Q	R	S	A	I	V	D	G	G	L	H	I	G	A	L	Q	S	L	Q	P	E	D	L	P	P	S	R	V	V	L	R	D	T	N	V	T	A	V	P	A	S	G	A	P	A
Template Known Secondary structure								S	T	T							S					S	T	T						T	T							S					S	B							S	S			S				S									S							T	T	S			S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	F	D	P	N	G	H	D	S	N	G	D	G	V	K	D	T	N	G	G	W	T	D	D	S	L	N	V	D	E	L	N	L	T	L	D	N	G	S	K	W	V	G	Q	A	I	Y	N	V	A	E	T	S	A	M	Y	D	V	A	T	N	S	L	T	P	D	A	T	Y	E	N	N	D	W	K	R	V	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	S	V	L	G	A	S	E	L	T	L	D	G	G	H	I	T	G	G	R	A	A	G	V	A	A	M	Q	G	A	V	V	H	L	Q	R	A	T	I	R	R	G	D	A	L	A	G	G	A	V	P	G	G	A	V	P	G	G	A	V	P	G	G	F	G	P	G	G	F	G	P	V	L	D	G	W	Y	G	V
Template Known Secondary structure							S	S														S	S							S	S												S						S	S	S	S	S		S	S			S					S	S	S			S	S				S	S		S
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	V	F	Q	S	G	V	F	N	V	A	L	N	N	G	S	E	W	D	T	T	G	R	S	I	V	D	T	L	T	V	N	N	G	S	Q	V	N	V	S	E	S	K	L	T	S	D	T	I	D	L	T	N	G	S	S	L	N	I	G	E	D	G	Y	V	D	T	D	H	L	T	I	N	S	Y	S	T	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	S	G	S	S	V	E	L	A	Q	S	I	V	E	A	P	E	L	G	A	A	I	R	V	G	R	G	A	R	V	T	V	P	G	G	S	L	S	A	P	H	G	N	V	I	E	T	G	G	A	R	R	F	A	P	Q	A	A	P	L	S	I	T	L	Q	A	G	A	H	A	Q	G	K	A	L	L	Y	R	V
Template Known Secondary structure					S	S						S							S	S								T	T							S	S																S	S			S	S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	E	S	T	G	W	G	A	D	Y	N	L	Y	A	N	T	I	T	V	T	N	G	G	V	L	D	V	N	V	D	Q	F	D	T	E	A	F	R	T	D	K	L	E	L	T	S	G	N	I	A	D	H	N	G	N	V	V	S	G	V	F	D	I	H	S	S	D	Y	V	L	N	A	D	L	V	N	D	R	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P	E	P	V	K	L	T	L	T	G	G	A	D	A	Q	G	D	I	V	A	T	E	L	P	S	I	P	G	T	S	I	G	P	L	D	V	A	L	A	S	Q	A	R	W	T	G	A	T	R	A	V	D	S	L	S	I	D	N	A	T	W	V	M	T	D	N	S	N	V	G	A	L	R	L	A	S	D	G	S
Template Known Secondary structure		S	S									T	T											S		S	S	S		G	G	G	S									T	T							B	S									S							S											T	T
Template Predicted Secondary structure
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
		557	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	D	T	S	K	S	N	Y	G	Y	G	I	V	A	M	N	S	D	G	H	L	T	I	N	G	N	G	D	V	D	N	G	T	E	L	D	N	S	S	V	D	N	V	V	A	A	T	G	N	Y	K	V	R	I	D	N	A	T	G	A	G	A	I	A	D	Y	K	D	K	E	I	I	Y	V	N	D	V	N	S	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	F	Q	Q	P	A	E	A	G	R	F	K	V	L	T	V	N	T	L	A	G	S	G	L	F	R	M	N	V	F	A	D	L	G	L	S	D	K	L	V	V	M	Q	D	A	S	G	Q	H	R	L	W	V	R	N	S	G	S	E	P	A	S	A	N	T	L	L	L	V	Q	T	P	L	G	S	A	A	T	F
Template Known Secondary structure								S	S	T	T																						G	G	G	T													S										S				S	S											S	S
Template Predicted Secondary structure
Template SS confidence
		425	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
		637	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.		660	.	.	.	.	.	.	.	.	.	670
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		A	T	F	S	A	A	N	K	A	D	L	G	A	Y	T	Y	Q	A	E	Q	R	G	N	.	T	V	V	L	Q	Q	M	E	L	T	D
Query Conservation																									.
Alig confidence																									.
Template Conservation
Template Sequence		T	L	A	N	K	D	G	K	V	D	I	G	T	Y	R	Y	R	L	A	A	N	G	N	G	Q	W	S	L	V	G	A	K	A	P	P
Template Known Secondary structure					S	G	G	G					T	T									S	S	S
Template Predicted Secondary structure
Template SS confidence
		505	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.