Return to main results Retrieve Phyre Job Id

Job DescriptionP77199
Confidence2.23%DateThu Jan 5 12:26:15 GMT 2012
Rank90Aligned Residues10
% Identity40%Templatec3dshA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:interferon regulatory factor 5; PDBTitle: crystal structure of dimeric interferon regulatory factor 5 (irf-5)2 transactivation domain
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10...
Predicted Secondary structure 

Query SS confidence 









Query Sequence  WKKKLVVSQL
Query Conservation            
Alig confidence 









Template Conservation    



 
 
Template Sequence  REKKLITVQV
Template Known Secondary structure  GGG
S
Template Predicted Secondary structure 



Template SS confidence 









   399400........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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