Job Description P77199 Confidence 17.54% Date Thu Jan 5 12:26:15 GMT 2012 Rank 52 Aligned Residues 133 % Identity 15% Template c2o4vA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:porin p; PDBTitle: an arginine ladder in oprp mediates phosphate specific transfer across2 the outer membrane Resolution 1.94 Å

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		727	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	Y	D	Q	D	V	N	G	I	M	V	G	V	D	T	K	I	D	G	N	N	A	K	W	I	V	G	A	A	A	G	F	A	K	G	D	M	N	D	R	S	G	Q	V	D	Q	D	S	Q	T	A	Y	I	Y	S	S	A	H	F	A	N	N	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.
Template Sequence		W	K	D	D	S	V	W	G	L	E	G	A	W	A	L	G	A	.	.	.	.	.	.	.	.	F	S	A	Q	A	E	Y	L	R	R	T	V	K	A	E	R	D	R	E	D	L	K	A	S	G	Y	Y	A	Q	L	A	Y	T	L	T	G	E	P	R	L	Y	K	L	D	G	A	K	F	D	T	I	K	P	E	N
Template Known Secondary structure																	T	T	.	.	.	.	.	.	.	.																T	T																	T	T								T	T	T	T								S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.									.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
							791	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.		.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.			.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.
Predicted Secondary structure		.	.	.	.	.																		.																																						.	.
Query SS confidence		.	.	.	.	.																		.																																						.	.
Query Sequence		.	.	.	.	.	V	D	G	S	L	S	Y	S	H	F	N	N	D	L	S	A	T	.	M	S	N	G	T	Y	V	D	G	S	T	N	S	D	A	W	G	F	G	L	K	A	G	Y	D	F	K	L	G	D	A	G	Y	V	T	P	Y	.	.	G	S	V	S	G	L	F	Q	S	G	D	D	Y	Q	L	S	N	D
Query Conservation		.	.	.	.	.																		.																																						.	.
Alig confidence		.	.	.	.	.																		.																					.	.	.	.	.	.	.	.	.	.								.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.
Template Sequence		K	E	I	G	A	W	E	L	F	Y	R	Y	D	S	I	K	V	E	D	D	N	I	V	V	D	S	A	T	R	E	V	G	D	A	K	G	K	T	H	T	L	G	V	.	.	.	.	.	.	.	.	.	.	N	W	Y	A	N	E	A	V	K	V	S	A	N	Y	V	K	A	K	T	D	K	I	S	N	A	N	G
Template Known Secondary structure		T	T	T																	T	T			S			S	S	B		S	S												.	.	.	.	.	.	.	.	.	.					S	S	S														S	B			T	T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.											370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		863	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	V	D	G	Q	S	Y	D	S	M	R	Y	E	L	G	V	D	A
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	D	D	S	G	D	G	L	V	M	R	L	Q	Y	V	F
Template Known Secondary structure		.	.	.	.
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						397	.	.	400	.	.	.	.	.	.	.	.	.	410	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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