Job Description P77199 Confidence 98.95% Date Thu Jan 5 12:26:15 GMT 2012 Rank 16 Aligned Residues 162 % Identity 13% Template c2f1tB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:outer membrane protein w; PDBTitle: outer membrane protein ompw Resolution 3.00 Å

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		785	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	N	N	V	F	V	D	G	S	L	S	Y	S	H	F	N	N	D	L	S	A	T	M	S	N	G	T	Y	V	D	G	S	T	N	S	D	A	W	G	F	G	L	K	A	G	Y	D	F	K	L	G	D	A	G	Y	V	T	P	Y	G	S	V	S	G	L	F	Q	S	G	D	D	Y	Q	L	S	N	D	M	K
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.															.	.							.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.															.	.							.	.	.	.
Template Sequence		E	A	G	E	F	F	M	R	A	G	S	A	T	V	R	P	T	E	G	G	G	F	S	V	T	.	.	.	.	.	.	.	.	.	.	.	N	N	T	Q	L	G	L	T	F	T	Y	M	A	T	.	.	D	N	I	G	V	E	.	.	.	.	L	L	A	A	T	P	F	R	H	K	I	G	T	R	A	T	G	D
Template Known Secondary structure			T	T																							.	.	.	.	.	.	.	.	.	.	.															.	.	T	T					.	.	.	.					S									T	T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.															.	.							.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.												.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		865	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.						.	.	.	.	.	930	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.
Query Sequence		V	D	G	Q	S	Y	D	S	M	R	Y	E	L	G	V	D	A	G	Y	T	F	T	Y	S	E	D	Q	A	L	T	P	Y	F	K	L	A	Y	V	Y	D	D	S	N	N	D	N	D	V	N	G	D	S	I	D	N	G	T	E	G	S	.	.	.	.	.	A	V	R	V	G	L	G	T	Q	F	S	F	T	K	N
Query Conservation																																																														.	.	.	.	.
Alig confidence										.	.	.	.																.																																	.	.	.	.	.
Template Conservation										.	.	.	.																.
Template Sequence		I	A	T	V	H	H	L	P	.	.	.	.	P	T	L	M	A	Q	W	Y	F	G	D	A	S	S	K	.	F	R	P	Y	V	G	A	G	I	N	Y	T	T	F	F	D	N	G	F	N	D	H	G	K	E	A	G	L	S	D	L	S	L	K	D	S	W	G	A	A	G	Q	V	G	V	D	Y	L	I	N	R	D
Template Known Secondary structure										.	.	.	.										S		T	T		S	.																										T	T																							S	S	S
Template Predicted Secondary structure										.	.	.	.																.
Template SS confidence
		73	.	.	.	.	.	.	80					.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.																.	.	.	.	960	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	S	A	Y	T	D	A	N	Y	L	G	G	G	D	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	D	W	S	A	N	V	G	V	K	Y	T	W
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	L	V	N	M	S	V	W	Y	M	D	I	D	T	T	A	N	Y	K	L	G	G	A	Q	Q	H	D	S	V	R	L	D	P	W	V	F	M	F	S	A	G	Y	R	F
Template Known Secondary structure																						S	S
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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