 |
Job Description | P77199 | Confidence | 13.40% | Date | Thu Jan 5 12:26:15 GMT 2012 |
Rank | 53 | Aligned Residues | 69 |
% Identity | 22% | Template | c1qd6C_ |
PDB info |
PDB header:membrane protein | Chain: C: PDB Molecule:protein (outer membrane phospholipase (ompla)); |
PDBTitle: outer membrane phospholipase a from escherichia coli
|
Resolution | 2.10 Å |
|
 |
  |   |
896 | . | . | . | 900 | . | . | . | . | . | . | . | . | . | 910 | . | . | . | . | . | . | . | . | . | 920 | . | . | . | . | . | . | . | . | . | 930 | . | . | . | . | . | . | . | . | . | 940 | . | . | . | . | . | . | . | . | . | 950 | . | . | |
|
|
. | . | . | . | |
. | . | . | 960 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | F | K | L | A | Y | V | Y | D | D | S | N | N | D | N | D | V | N | G | D | S | I | D | N | G | T | E | G | S | A | V | R | V | G | L | G | T | Q | F | S | F | T | K | N | F | S | A | Y | T | D | A | N | Y | L | G | G | G | . |
. |
. |
D | V | D | Q | . |
D | W | S | A | N | V | G | V | K | Y | T |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   | . | . | . |   |   |   |   | . |   |   |   |   |   |   |
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |   |
|   |   |   |   |   | . | . | . |   |   |   |   |   |
|
|   |
|   |   |   |   |   |
|   |
|
|
|   |   |
|
|
|
|   |   |   |
|   |   |
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|   |   |   |   |
|
|
|
|
|
|   |
|   |
Template Sequence |   |
Y | Y | Q | L | K | I | G | Y | H | L | G | D | A | . |
. |
. |
V | L | S | A | K | G | Q | Y | N | W | N | T | G | Y | G | G | A | E | L | G | L | S | Y | P | I | T | K | H | V | R | L | Y | T | Q | V | Y | S | G | Y | G | E | S | L | I | D | Y | N | F | N | Q | T | R | V | G | V | G | V | M | L | N |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  | T | T |  | . | . | . |  |  |  |  |  |  |  |  |
| T | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |
| S | S | G | G | G | T | T |
|  |  |  |  |  |  |  |  |  |  | S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
194 | . | . | . | . | . | 200 | . | . | . | . | . | . | |
|
|
. | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|