Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABW0
Confidence99.94%DateThu Jan 5 11:16:30 GMT 2012
Rank15Aligned Residues99
% Identity17%Templated2jo6a1
SCOP infoISP domain ISP domain NirD-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1. .......10.........20. ........30 .........40......... 50.........60.........70..
Predicted Secondary structure 

.





.


..










....










Query SS confidence 

.


















.








. .


















. . . .






















Query Sequence  MN. RIYACPVADVPEGEALRID. TSPVIALFN. . VGGEFYAINDRCSHGNASM. . . . SEGYLEDDATVECPLHAASFCLK
Query Conservation 
 .   

   

  
    
 .    
 
  ..  
   
    


 
  
....  
       
 

 

  


 
Alig confidence 

.


















.








..


















....






















Template Conservation 

 
  
    

  
        
  
 
      
 
 
    


 
   
  
          
 

 

  

  
Template Sequence  MSQWKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISNIDPFFESSVLSRGLIAEHQGELWVASPLKKQRFRLS
Template Known Secondary structure 



TTTS
TTTT
SSSS

SS
SSS

S
STTSTTTTTTTT
Template Predicted Secondary structure 













































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   73......80.........90.........100
Predicted Secondary structure 












Query SS confidence 



























Query Sequence  TGKALCLPATDPLTTYPVHVEGGDIFID
Query Conservation 

     
    
    
    
 
 
 
Alig confidence 








.

















Template Conservation 

       .  
  
 
 
  
 
 
 
Template Sequence  DGLCMEDEQ. FSVKHYEARVKDGVVQLR
Template Known Secondary structure  TTTTTTT.T


TT
Template Predicted Secondary structure 








.






Template SS confidence 



























   81........ 90.........100.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions