Job Description P0ABW0 Confidence 99.86% Date Thu Jan 5 11:16:30 GMT 2012 Rank 31 Aligned Residues 104 % Identity 19% Template c2b1xE_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:naphthalene dioxygenase large subunit; PDBTitle: crystal structure of naphthalene 1,2-dioxygenase from rhodococcus sp. Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.				.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		N	R	I	Y	A	C	P	V	A	D	V	P	E	G	E	.	.	.	A	L	R	I	D	T	S	P	V	I	A	L	F	N	V	G	G	E	F	Y	A	I	N	D	R	C	S	H	G	N	A	S	M	S	E	G	Y	L	E	D	D	A	T	V	E	C	P	L	H	A	A	S	F	C	L	K	T	G	K	A	L	C
Query Conservation																	.	.	.
Alig confidence																	.	.	.																																																								.
Template Conservation																																																																											.
Template Sequence		A	W	V	F	L	A	H	E	S	E	I	P	E	R	G	D	Y	V	V	R	Y	I	S	E	D	Q	F	I	V	C	R	D	E	G	G	E	I	R	G	H	L	N	A	C	R	H	R	G	M	Q	V	C	R	A	E	M	G	N	T	S	H	F	R	C	P	Y	H	G	W	T	Y	S	N	.	T	G	S	L	V	G
Template Known Secondary structure		S							G	G	G	S		S	T	T								T	T									T	T	S							S	S		T	T	T				S			S	S					S					T	T	T						T	.	T	S
Template Predicted Secondary structure																																																																											.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.
		79	80													.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.									.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.									.
Query Sequence		L	P	.	.	.	.	.	.	.	.	.	.	.	.	A	T	D	P	L	T	T	Y	.	P	V	H	V	E	G	G	D	I	F	I	D	L	P	E	A	Q	P
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.									.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation
Template Sequence		V	P	A	G	K	D	A	Y	G	N	Q	L	K	K	S	D	W	N	L	R	P	M	P	N	L	A	S	Y	K	G	L	I	F	G	S	L	D	P	H	A	D
Template Known Secondary structure			T	T	T	T	T	T	T	T	T				G	G	G	S	S			B		S						T	T						S		T	T
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions