Job Description P69801 Confidence 3.75% Date Thu Jan 5 12:12:01 GMT 2012 Rank 24 Aligned Residues 107 % Identity 14% Template d1iwga8 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

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		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	I	S	T	I	L	V	I	A	G	H	Q	S	I	G	A	G	I	A	L	A	I	P	L	A	A	A	G	Q	V	L	T	I	I	V	R	T	I	T	V	A	F	Q	H	A	A	D	K	A	A	D	N	G	N	L	T	A	I	S	W	I	H	V	S	S	L	F	L	Q	A	M	R	V	A	I	P	A	V	I
Query Conservation
Alig confidence																																																																															.
Template Conservation																																																																															.
Template Sequence		G	V	I	G	A	L	L	A	A	T	F	R	G	L	T	N	D	V	Y	F	Q	V	G	L	L	T	T	I	G	L	S	A	K	N	A	I	L	I	V	E	F	A	K	D	L	M	D	K	E	G	K	G	L	I	E	A	T	L	D	A	V	R	M	R	L	R	P	I	L	M	T	S	L	A	F	I	L	.	G	V
Template Known Secondary structure													T	T			B																														T	T	S	S				T	T									T	T														.
Template Predicted Secondary structure																																																																															.
Template SS confidence
		908	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.		.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	L	S	V	G	T	S	E	V	Q	N	M	L	N	A	I	P	E	V	V	T	N	G	L	N	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	P	L	V	I	S	T	G	A	G	S	G	A	Q	N	A	V	G	T	G	V	M	G	G	M	V	T	A
Template Known Secondary structure						T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		987	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions