Job Description P69801 Confidence 1.90% Date Thu Jan 5 12:12:01 GMT 2012 Rank 89 Aligned Residues 184 % Identity 9% Template c3mkuA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:multi antimicrobial extrusion protein (na(+)/drug PDBTitle: structure of a cation-bound multidrug and toxin compound extrusion2 (mate) transporter Resolution 4.20 Å

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	A	L	A	S	I	I	S	T	I	L	V	I	A	G	H	Q	S	I	G	A	G	I	A	L	A	I	P	L	A	A	A	G	Q	V	L	T	I	I	V	R	T	I	T	V	A	F	Q	H	A	A	D	K	A	A	D	N	G	N	L	T	A	I	S	W	I	H	V	S	S	L	F	L	Q	A	M	R	V	A
Query Conservation
Alig confidence																																																																															.
Template Conservation																																																																															.
Template Sequence		A	L	F	F	E	V	T	L	F	A	V	V	A	L	L	V	A	P	L	G	S	T	V	V	A	A	H	Q	V	A	L	N	F	S	S	L	V	F	M	F	P	M	S	I	G	A	A	V	S	I	R	V	G	H	K	L	G	E	Q	D	T	K	G	A	A	I	A	A	N	V	G	L	M	T	G	L	A	.	T	A
Template Known Secondary structure																	T			S		S	T					T	T																											G	G	G	S	S				T	T	T	T												.
Template Predicted Secondary structure																																																																															.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.											.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																					.	.																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	P	A	V	I	V	A	L	S	V	G	T	S	E	V	Q	N	M	L	.	.	N	A	I	P	E	V	V	T	N	G	L	N	I	A	G	G	M	I	V	V	V	G	Y	A	M	V	I	N	M	M	R	A	.	.	.	.	.	.	.	.	.	.	G	Y	L	M	P	F	F	Y	L	G	F	V	T	A	A	F	T
Query Conservation																					.	.																																	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.																																	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	I	T	A	L	L	T	V	L	F	R	E	Q	I	A	L	L	Y	T	E	N	Q	V	V	V	A	L	A	M	Q	L	L	L	F	A	A	I	Y	Q	C	M	D	A	V	Q	V	V	A	A	G	S	L	R	G	Y	K	D	M	T	A	I	F	H	R	T	F	I	S	Y	W	V	L	G	L	P	T	G	Y	I	L
Template Known Secondary structure																		T	S	S		S	S	T	T																													G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
											221	.	.	.	.	.	.	.	.						230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.										.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.										.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	N	F	N	L	V	A	L	G	V	.	.	.	.	.	I	G	T	V	M	A	V	L	Y	I	Q	L	S	P	K	Y	N	R	V	A	G	A	P	A	Q	A	A	G
Query Conservation		.	.	.	.	.	.	.	.	.										.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.										.	.	.	.	.
Template Conservation
Template Sequence		G	M	T	N	W	L	T	E	Q	P	L	G	A	K	G	F	W	L	G	F	I	I	G	L	S	A	A	A	L	M	L	G	Q	R	L	Y	W	L	Q	K	Q	S	D	D	V	Q	L	H	L	A	A
Template Known Secondary structure						S	S	S			S																					T	G	G	G	S	T	T	T			S	S		T	T	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions