Job Description P0A6Z3 Confidence 98.54% Date Thu Jan 5 11:04:17 GMT 2012 Rank 46 Aligned Residues 152 % Identity 15% Template c3g7bB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:dna gyrase subunit b; PDBTitle: staphylococcus aureus gyrase b co-complex with inhibitor Resolution 2.30 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	E	L	I	S	N	A	S	D	A	A	D	K	L	R	F	R	A	L	S	N	P	D	L	Y	E	G	D	G	E	L	R	V	R	V	S	F	D	K	D	K	R	T	L	T	I	S	D	N	G	V	G	M	T	R	D	E	V	I	D	H	L	G	T	I	A	K	S	G	T	K	S	F	L	E	S	L	G	S
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.															.	.	.	.	.	.	.										.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.															.	.	.	.	.	.	.										.	.	.	.	.	.	.
Template Sequence		V	W	E	I	V	D	N	S	I	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	A	G	Y	A	N	Q	I	E	V	V	I	E	K	D	N	.	W	I	K	V	T	D	N	G	R	G	I	P	V	D	.	.	.	.	.	.	.	I	Q	E	K	M	G	R	P	A	.	.	.	.	.	.	.
Template Known Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	S										G	G	G	.								S	S					S	.	.	.	.	.	.	.	B		T	T	T	S		B		.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.															.	.	.	.	.	.	.										.	.	.	.	.	.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.															.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.								90	.	.	.	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		D	Q	A	K	D	S	Q	L	I	G	Q	F	G	V	G	F	Y	S	A	F	I	V	A	D	K	V	T	V	R	T	R	A	A	G	E	K	P	E	N	G	V	F	W	E	S	A	G	E	G	E	Y	T	V	A	D	I	T	K	E	D	R	G	T	E	I	T	L	H	L	R	E	G	E	D	E	F	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																											.	.																															.	.								.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																											.	.																															.	.
Template Sequence		.	.	.	.	.	.	.	.	.	V	E	V	I	L	T	S	S	V	V	N	A	L	S	Q	D	L	E	V	Y	V	H	R	N	E	T	.	.	I	Y	H	Q	A	Y	K	K	G	V	P	Q	F	D	L	K	E	V	G	T	T	D	K	T	G	T	V	I	R	F	.	.	K	A	D	G	E	I	F	T	E	T	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.						T	T						T											T	T		.	.								T	T			S	S									S									.	.				T	T	T			S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																											.	.																															.	.
Template SS confidence
											99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.
			188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure		.																		.
Query SS confidence		.																		.
Query Sequence		.	L	D	D	W	R	V	R	S	I	I	S	K	Y	S	D	H	I	.	A	L	P	V	E	I	E	K	R	E	E	K	D	G	E	T	V	I	S	W	E
Query Conservation		.																		.
Alig confidence		.																		.
Template Conservation
Template Sequence		V	Y	N	Y	E	T	L	Q	Q	R	I	R	E	L	A	F	L	N	K	G	I	Q	I	T	L	R	D	E	R	D	E	E	N	V	R	E	D	S	Y	H
Template Known Secondary structure																			S	T	T									S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions