Job Description P0A6Z3 Confidence 100.00% Date Thu Jan 5 11:04:17 GMT 2012 Rank 7 Aligned Residues 379 % Identity 38% Template c2o1tB_ PDB info PDB header:chaperone Chain: B: PDB Molecule:endoplasmin; PDBTitle: structure of middle plus c-terminal domains (m+c) of grp94 Resolution 3.20 Å

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		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	L	W	T	R	N	K	S	E	I	T	D	E	E	Y	K	E	F	Y	K	H	I	A	H	D	F	N	D	P	L	T	W	S	H	N	R	V	E	G	K	Q	E	Y	T	S	L	L	Y	I	P	S	Q	A	P	W	D	M	W	N	R	D	H	K	H	G	L	K	L	Y	V	Q	R	V	F	I	M	D	D	A
Query Conservation
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.
Template Sequence		K	P	I	W	Q	R	P	S	K	E	V	E	D	D	E	Y	K	A	F	Y	K	S	F	S	K	E	S	D	D	P	M	A	Y	I	H	F	T	A	E	G	E	V	T	F	K	S	I	L	F	V	P	T	S	A	P	.	.	.	.	.	.	.	.	.	.	Y	I	K	L	Y	V	R	R	V	F	I	T	D	D	F
Template Known Secondary structure				G	G	G	S		G	G	G	S												T	T		T	T				S									S	S	S										S				.	.	.	.	.	.	.	.	.	.							T	T					S
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.											.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	F	M	P	N	Y	L	R	F	V	R	G	L	I	D	S	S	D	L	P	L	N	V	S	R	E	I	L	Q	D	S	T	V	T	R	N	L	R	N	A	L	T	K	R	V	L	Q	M	L	E	K	L	A	K	D	D	A	E	K	Y	Q	T	F	W	Q	Q	F	G	L	V	L	K	E	G	P	A	E	D	F
Query Conservation
Alig confidence																																																								.	.
Template Conservation																																																								.	.
Template Sequence		H	D	M	M	P	K	Y	L	N	F	V	K	G	V	V	D	S	D	D	L	P	L	N	V	S	R	E	T	L	Q	Q	H	K	L	L	K	V	I	R	K	K	L	V	R	K	T	L	D	M	I	K	K	I	A	.	.	D	E	K	Y	N	D	T	F	W	K	E	F	G	T	N	I	K	L	G	V	I	E	D	H
Template Known Secondary structure		T	T	S	S		G	G	G	T	T								S	S	S		S	S	S							T																					T	S		.	.	S						T																	G
Template Predicted Secondary structure																																																								.	.
Template SS confidence
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.			.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	Q	E	A	I	A	K	L	L	R	F	A	S	T	H	T	D	S	S	A	Q	T	V	S	L	E	D	Y	V	S	R	M	K	E	G	Q	E	K	I	Y	Y	I	T	A	D	S	Y	A	A	A	K	S	S	P	H	L	E	L	L	R	K	K	G	I	E	V	L	L	L	S	D	R	I	D	E	W	M	M	N
Query Conservation
Alig confidence																			.	.
Template Conservation																			.	.
Template Sequence		S	N	R	T	R	L	A	K	L	L	R	F	Q	S	S	H	H	.	.	P	S	D	I	T	S	L	D	Q	Y	V	E	R	M	K	E	K	Q	D	K	I	Y	F	M	A	G	S	S	R	K	E	A	E	S	S	P	F	V	E	R	L	L	K	K	G	Y	E	V	I	Y	L	T	E	P	V	D	E	Y	C	I	Q
Template Known Secondary structure		G	G						T	T						T	T		.	.																S	S										S	S							S	G	G	G							T								S	T	T
Template Predicted Secondary structure																			.	.
Template SS confidence
		501	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.			.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.		.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		Y	L	T	E	F	D	G	K	P	F	Q	S	V	S	K	V	D	E	S	L	E	K	L	A	D	E	V	D	E	S	A	K	E	A	E	K	A	L	T	P	F	I	D	R	V	K	A	.	L	L	G	E	R	V	K	D	V	R	L	T	H	R	L	T	D	T	P	A	I	V	S	T	D	A	D	E	M	S	T	Q
Query Conservation																																																	.
Alig confidence																									.																								.
Template Conservation																									.
Template Sequence		A	L	P	E	F	D	G	K	R	F	Q	N	V	A	K	E	G	V	K	F	D	E	S	.	E	K	T	K	E	S	R	E	A	I	E	K	E	F	E	P	L	L	N	W	M	K	D	K	A	L	K	D	K	I	E	K	A	V	V	S	Q	R	L	T	E	S	P	C	A	L	V	A	S	Q	Y	G	W	S	G	N
Template Known Secondary structure		T					T	T						T	T	B	S								.																								T	T	T	T	T	T								S	S		S	S		S					B		T	T	S
Template Predicted Secondary structure																									.
Template SS confidence
		579	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.		.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.
		550	.	.	.	.	.	.	.	.	.	560										.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.					.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.																								.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.																								.	.	.	.
Query Sequence		M	A	K	L	F	A	A	A	G	Q	K	.	.	.	.	.	.	.	.	.	V	P	E	V	K	Y	I	F	E	L	N	P	D	H	V	L	V	K	R	A	A	D	T	.	.	.	.	E	D	E	A	K	F	S	E	W	V	E	L	L	L	D	Q	A	L	L	A	E	R	G	T	L	E	D	P	N	L	F	I	R
Query Conservation													.	.	.	.	.	.	.	.	.																								.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.																								.	.	.	.
Template Conservation
Template Sequence		M	E	R	I	M	K	A	Q	A	Y	Q	T	G	K	D	I	S	T	N	Y	Y	A	S	Q	K	K	T	F	E	I	N	P	R	H	P	L	I	K	D	M	L	R	R	V	K	E	D	E	D	D	K	T	V	S	D	L	A	V	V	L	F	E	T	A	T	L	R	S	G	Y	L	L	P	D	T	K	A	Y	G	D
Template Known Secondary structure													T	S	S			T	T		S	S	S	S									T	T															T	T																			T	T				S
Template Predicted Secondary structure
Template SS confidence
		658	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.
		617	.	.	620	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	N	Q	L	L	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	I	E	R	M	L	R	L
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		738	.	740	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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