Job Description P0A6Z3 Confidence 98.22% Date Thu Jan 5 11:04:17 GMT 2012 Rank 51 Aligned Residues 129 % Identity 22% Template c1zxnB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:dna topoisomerase ii, alpha isozyme; PDBTitle: human dna topoisomerase iia atpase/adp Resolution 2.51 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.									.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.
Query Sequence		E	L	I	S	N	A	S	D	A	A	D	K	L	R	F	R	A	L	S	N	P	D	L	Y	E	G	D	G	E	L	R	V	R	V	S	F	D	K	D	K	R	T	L	T	I	S	D	N	G	V	G	M	T	R	D	.	.	.	.	.	.	.	.	E	V	I	D	H	L	G	T	I	A	K	S	G	T	K	S	F
Query Conservation																																																									.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.															.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.
Template Sequence		E	I	L	V	N	A	A	D	N	K	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	D	P	K	M	S	C	I	R	V	T	I	D	P	E	N	N	L	I	S	I	W	N	N	G	K	G	I	P	V	V	E	H	K	V	E	K	M	Y	V	P	A	L	I	F	G	Q	L	L	T	S	S	N	.	.	.
Template Known Secondary structure										G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T		T	T										T	T	T	T								S	S					S			T	T	T	T										S	S	S			S		.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.														.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		L	E	S	L	G	S	D	Q	A	K	D	S	Q	L	I	G	Q	F	G	V	G	F	Y	S	A	F	I	V	A	D	K	V	T	V	R	T	R	A	A	G	E	K	P	E	N	G	V	F	W	E	S	A	G	.	E	G	E	Y	T	V	A	D	I	T	K	E	D	R	G	T	E	I	T	L	H	L	R	E	G
Query Conservation																																																							.
Alig confidence		.	.	.	.	.																																																	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	Y	D	D	D	E	K	K	V	T	G	G	R	N	G	Y	G	A	K	L	C	N	I	F	S	T	K	F	T	V	E	T	A	S	R	E	Y	K	K	M	F	K	Q	T	W	M	D	N	M	G	R	A	G	E	M	E	L	K	P	F	N	G	E	D	Y	T	C	I	T	F	Q	P	D	L	S
Template Known Secondary structure		.	.	.	.	.			G	G	G					S			S	S									T											G	G	G	T									T	T	T	T												S	S											G	G
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions