Job Description P0A6Z3 Confidence 99.18% Date Thu Jan 5 11:04:17 GMT 2012 Rank 44 Aligned Residues 277 % Identity 19% Template c1s16B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:topoisomerase iv subunit b; PDBTitle: crystal structure of e. coli topoisomerase iv pare 43kda subunit2 complexed with adpnp Resolution 2.10 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.									90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.
Query Sequence		L	R	E	L	I	S	N	A	S	D	A	A	D	K	L	R	F	R	A	L	S	N	P	D	L	Y	E	G	D	G	E	L	R	V	R	V	S	F	D	K	D	K	R	T	L	T	I	S	D	N	G	V	G	M	T	R	D	E	.	.	.	.	.	.	.	.	V	I	D	H	L	G	T	I	A	K	S	G	T	K
Query Conservation																																																												.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																.	.	.	.	.	.	.	.														.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																																					.
Template Sequence		G	Q	E	V	I	D	N	S	V	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	A	G	H	A	K	R	V	D	V	I	L	H	A	D	Q	.	S	L	E	V	I	D	D	G	R	G	M	P	V	D	I	H	P	E	E	G	V	P	A	V	E	L	I	L	C	R	L	H	A	G	G	K	.
Template Known Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T			S								T	T	S	.								S	S					S	B		T	T	T		S	B									T	T		S	S		.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																																					.
Template SS confidence
		2036	.	.	.	2040	.	.	.	.	.	.															.	.	.	2050	.	.	.	.	.	.	.	.	.	2060	.	.	.		.	.	.	.	.	.	2070	.	.	.	.	.	.	.	.	.	2080	.	.	.	.	.	.	.	.	.	2090	.	.	.	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.					.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.
Query SS confidence																																																												.	.	.	.
Query Sequence		S	F	L	E	S	L	G	S	D	Q	A	K	D	S	Q	L	I	G	Q	F	G	V	G	F	Y	S	A	F	I	V	A	D	K	V	T	V	R	T	R	A	A	G	E	K	P	E	N	G	V	F	W	E	S	A	G	E	G	E	.	.	.	.	Y	T	V	A	D	I	T	K	E	D	R	G	T	E	I	T	L	H
Query Conservation																																																												.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																				.	.	.	.													.	.	.	.
Template Conservation		.	.	.	.	.	.	.																																				.	.	.	.
Template Sequence		.	.	.	.	.	.	.	F	S	N	K	N	Y	Q	F	S	G	G	L	H	G	V	G	I	S	V	V	N	A	L	S	K	R	V	E	V	N	V	R	R	D	G	.	.	.	.	Q	V	Y	N	I	A	F	E	N	G	E	K	V	Q	D	L	Q	V	V	G	T	C	G	K	R	N	T	G	T	S	V	H	F	W
Template Known Secondary structure		.	.	.	.	.	.	.	S	S	S	S	S		S	S		S			S	S									T											T	T	.	.	.	.									T	T														T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.																																				.	.	.	.
Template SS confidence
									2100	.	.	.	.	.	.	.	.	.	2110	.	.	.	.	.	.	.	.	.	2120	.	.	.	.	.	.	.	.	.	2130	.	.	.	.					.	.	.	.	.	2140	.	.	.	.	.	.	.	.	.	2150	.	.	.	.	.	.	.	.	.	2160	.	.	.	.	.	.	.	.
		180	.	.	.	.	.	.	.					.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure										.	.	.	.																		.
Query SS confidence										.	.	.	.																		.
Query Sequence		L	R	E	G	E	D	E	F	.	.	.	.	L	D	D	W	R	V	R	S	I	I	S	K	Y	S	D	H	I	.	A	L	P	V	E	I	E	K	R	E	E	K	D	G	E	T	V	I	S	W	E	K	I	N	K	A	Q	A	L	W	T	R	N	K	S	E	I	T	D	E	E	Y	K	E	F	Y	K	H	I	A
Query Conservation										.	.	.	.																		.
Alig confidence		.	.							.	.	.	.																		.									.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template Conservation		.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template Sequence		.	.	P	D	E	T	F	F	D	S	P	R	F	S	V	S	R	L	T	H	V	L	K	A	K	A	V	L	C	P	G	V	E	I	T	F	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	N	N	T	E	Q	R	W	C	Y	Q	D	.	.	.	G	L	N	D	Y	L	A	E	A	V	N	G	L
Template Known Secondary structure		.	.			G	G	G	S	S			S																	S	T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T								S	S	.	.	.										T	T	T	S
Template Predicted Secondary structure		.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template SS confidence
				2169	2170	.	.	.	.	.	.	.	.	.	2180	.	.	.	.	.	.	.	.	.	2190	.	.	.	.	.	.	.	.	.	2200	.	.	.	.														.	.	.	.	.	2210	.	.	.	.	.	.	.				.	.	2220	.	.	.	.	.	.	.	.	.	2230
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.											.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Query Sequence		H	D	F	N	D	P	L	T	W	S	H	N	R	V	E	G	K	Q	E	Y	T	S	L	L	Y	I	P	S	Q	A	P	W	D	M	W	N	R	D	H	K	H	G	L	K	L	Y	V	Q	R	V	F	I	M	D	.	.	.	.	.	.	.	.	.	.	D	A	E	Q	F	M	P	N	Y	L	R	.	.	.	.	.
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.
Template Sequence		P	T	L	P	E	K	P	F	I	G	N	F	A	G	D	T	E	A	V	D	W	A	L	L	W	L	P	E	.	.	.	.	.	.	.	.	.	G	G	E	L	L	T	E	S	Y	V	N	L	I	P	T	M	Q	G	G	T	H	V	N	G	L	R	Q	G	L	L	D	A	M	R	E	F	C	E	Y	R	N	I	L
Template Known Secondary structure																S	S											T	T	.	.	.	.	.	.	.	.	.											T	T				T	T		B																					T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.
Template SS confidence
		2231	.	.	.	.	.	.	.	.	2240	.	.	.	.	.	.	.	.	.	2250	.	.	.	.	.	.	.	.										.	2260	.	.	.	.	.	.	.	.	.	2270	.	.	.	.	.	.	.	.	.	2280	.	.	.	.	.	.	.	.	.	2290	.	.	.	.	.	.	.	.	.	2300	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.																	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	V	R	G	L	I	D	S	S	D	L	P	L	N	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	I	L	Q	D	S	T	V	T	R	N	L	R	N	A	L	T	K	R	V	L	Q	M	L	E	K
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	R	G	V	K	L	S	A	E	D	I	W	D	R	C	A	Y	V	L	S	V	K	M	Q	D	P	Q	F	A	G	Q	T	K	E	R	L	S	S	R	Q	C	A	A	F	V	S	G	V	V	K	D	A	F	I	L	W	L	N	Q
Template Known Secondary structure			T	T										T	T										S	S			B	S	S	T	T				B			T	T
Template Predicted Secondary structure
Template SS confidence
		2302	.	.	.	.	.	.	.	2310	.	.	.	.	.	.	.	.	.	2320	.	.	.	.	.	.	.	.	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.	.	.	.	.	.	.	2350	.	.	.	.	.	.	.	.	.	2360

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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