Job Description P0A6Z3 Confidence 98.45% Date Thu Jan 5 11:04:17 GMT 2012 Rank 49 Aligned Residues 151 % Identity 18% Template c1qzrA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:dna topoisomerase ii; PDBTitle: crystal structure of the atpase region of saccharomyces cerevisiae2 topoisomerase ii bound to icrf-187 (dexrazoxane) Resolution 1.90 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.									.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.
Query Sequence		L	R	E	L	I	S	N	A	S	D	A	A	D	K	L	R	F	R	A	L	S	N	P	D	L	Y	E	G	D	G	E	L	R	V	R	V	S	F	D	K	D	K	R	T	L	T	I	S	D	N	G	V	G	M	T	R	D	.	.	.	.	.	.	.	.	E	V	I	D	H	L	G	T	I	A	K	S	G	T	K
Query Conservation																																																											.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.															.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.
Template Sequence		F	D	E	I	L	V	N	A	A	D	N	K	V	R	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	S	M	K	R	I	D	V	N	I	H	A	E	E	H	T	I	E	V	K	N	D	G	K	G	I	P	I	E	I	H	N	K	E	N	I	Y	I	P	E	M	I	F	G	H	L	L	T	S	S	N	.
Template Known Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.		T	T										T	T	T	T								S	S					S	B		T	T	T		S	B								S	S	S			S		.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.														.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		S	F	L	E	S	L	G	S	D	Q	A	K	D	S	Q	L	I	G	Q	F	G	V	G	F	Y	S	A	F	I	V	A	D	K	V	T	V	R	T	R	A	A	G	E	K	P	E	N	G	V	F	W	E	S	A	G	E	G	E	.	.	Y	T	V	A	D	I	T	K	E	D	R	G	T	E	I	T	L	H	L	R
Query Conservation																																																												.	.
Alig confidence		.	.	.	.	.	.	.																																																				.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	Y	D	D	D	E	K	K	V	T	G	G	R	N	G	Y	G	A	K	L	C	N	I	F	S	T	E	F	I	L	E	T	A	D	L	N	V	G	Q	K	Y	V	Q	K	W	E	N	N	M	S	I	C	H	P	P	K	I	T	S	Y	K	K	G	P	S	Y	T	K	V	T	F	K	P	D
Template Known Secondary structure		.	.	.	.	.	.	.			T	T	S					S			S	S									T											T	T	T	T									T	T	T	T												S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		182	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		E	G	E	D	E	F	.	.	L	D	D	W	R	V	R	S	I	I	S	K	Y	S	D	H
Query Conservation								.	.
Alig confidence								.	.
Template Conservation
Template Sequence		L	T	R	F	G	M	K	E	L	D	N	D	I	L	G	V	M	R	R	R	V	Y	D	I
Template Known Secondary structure		G	G	G	G	T		S	S
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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