Return to main results Retrieve Phyre Job Id

Job DescriptionP52062
Confidence42.00%DateThu Jan 5 12:05:07 GMT 2012
Rank382Aligned Residues46
% Identity9%Templated2cfxa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Lrp/AsnC-like transcriptional regulator N-terminal domain
Resolution2.4

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   306...310.........320.........330.........340.........350.
Predicted Secondary structure 











Query SS confidence 













































Query Sequence  DKPFEFFMNRFRLLEAAPRVEFIAYTGLCEDVIRPQLDEAIAQGYL
Query Conservation            
      
                  
  
   


Alig confidence 













































Template Conservation 
  
  

  
  
 
 
  


  



  

  

  
   


Template Sequence  DQIDLNIIEELKKDSRLSMRELGRKIKLSPPSVTERVRQLESFGII
Template Known Secondary structure 

S


T

TTSS
Template Predicted Secondary structure 












Template SS confidence 













































   4.....10.........20.........30.........40.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions