Return to main results Retrieve Phyre Job Id

Job DescriptionP52062
Confidence48.02%DateThu Jan 5 12:05:07 GMT 2012
Rank347Aligned Residues62
% Identity15%Templated1xmka1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Z-DNA binding domain
Resolution0.97

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   304.....310.........320.........330..... ....340.........350....... ..360.....
Predicted Secondary structure 








.




...
Query SS confidence 































.





















. . .







Query Sequence  ATDKPFEFFMNRFRLLEAAPRVEFIAYTGLCE. DVIRPQLDEAIAQGYLTECADY. . . WQITEHGK
Query Conservation              
      
            .      
  
   


      ...  

  
 
Alig confidence 































.





















...







Template Conservation 
  
  
 
   
   
 
 

 


 


 





  

 
 
 
 
 
   


 
 

   
Template Sequence  DMAEIKEKICDYLFNVSDSSALNLAKNIGLTKARDINAVLIDMERQGDVYRQGTTPPIWHLTDKKR
Template Known Secondary structure  T


GGGTTS
SSS

Template Predicted Secondary structure 






















Template SS confidence 

































































   295....300.........310.........320.........330.........340.........350.........360
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions